Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Hoxc6P10629 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.25■□□□□ 0.51
Hoxc6P10629 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc6P10629 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Gm14140-201ENSMUST00000119999 995 ntBASIC18.24■□□□□ 0.51
Hoxc6P10629 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.24■□□□□ 0.51
Hoxc6P10629 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Hoxc6P10629 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc6P10629 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
Hoxc6P10629 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.23■□□□□ 0.51
Hoxc6P10629 Gm43575-201ENSMUST00000196420 516 ntBASIC18.23■□□□□ 0.51
Hoxc6P10629 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.23■□□□□ 0.51
Hoxc6P10629 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hoxc6P10629 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Hoxc6P10629 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.23■□□□□ 0.51
Hoxc6P10629 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hoxc6P10629 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc6P10629 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.22■□□□□ 0.51
Hoxc6P10629 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.22■□□□□ 0.51
Hoxc6P10629 Gm8097-201ENSMUST00000117903 829 ntBASIC18.22■□□□□ 0.51
Hoxc6P10629 Gm4459-201ENSMUST00000118750 468 ntBASIC18.22■□□□□ 0.51
Hoxc6P10629 Gm14494-201ENSMUST00000118786 435 ntBASIC18.22■□□□□ 0.51
Hoxc6P10629 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hoxc6P10629 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.22■□□□□ 0.51
Hoxc6P10629 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxc6P10629 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm13036-201ENSMUST00000117799 748 ntBASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm9727-201ENSMUST00000161387 555 ntBASIC18.21■□□□□ 0.51
Hoxc6P10629 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxc6P10629 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxc6P10629 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.5
Hoxc6P10629 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hoxc6P10629 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.5
Hoxc6P10629 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hoxc6P10629 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc6P10629 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc6P10629 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc6P10629 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxc6P10629 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms