Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hoxc9P09633 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.29■■□□□ 1
Hoxc9P09633 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.29■■□□□ 1
Hoxc9P09633 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hoxc9P09633 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hoxc9P09633 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.29■■□□□ 1
Hoxc9P09633 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hoxc9P09633 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.28■■□□□ 1
Hoxc9P09633 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.28■■□□□ 1
Hoxc9P09633 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.28■■□□□ 1
Hoxc9P09633 Mir6404-201ENSMUST00000183699 94 ntBASIC21.28■■□□□ 1
Hoxc9P09633 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hoxc9P09633 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hoxc9P09633 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hoxc9P09633 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.28■■□□□ 1
Hoxc9P09633 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxc9P09633 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxc9P09633 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Hoxc9P09633 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxc9P09633 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxc9P09633 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hoxc9P09633 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.27■■□□□ 1
Hoxc9P09633 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxc9P09633 Rarb-207ENSMUST00000225921 2756 ntBASIC21.27■■□□□ 1
Hoxc9P09633 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hoxc9P09633 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hoxc9P09633 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hoxc9P09633 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Hoxc9P09633 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.26■□□□□ 0.99
Hoxc9P09633 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Gm14140-201ENSMUST00000119999 995 ntBASIC21.26■□□□□ 0.99
Hoxc9P09633 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.26■□□□□ 0.99
Hoxc9P09633 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.26■□□□□ 0.99
Hoxc9P09633 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.26■□□□□ 0.99
Hoxc9P09633 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hoxc9P09633 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.26■□□□□ 0.99
Hoxc9P09633 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.26■□□□□ 0.99
Hoxc9P09633 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxc9P09633 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.25■□□□□ 0.99
Hoxc9P09633 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Gm4995-201ENSMUST00000117247 432 ntBASIC21.25■□□□□ 0.99
Hoxc9P09633 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.25■□□□□ 0.99
Hoxc9P09633 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.25■□□□□ 0.99
Hoxc9P09633 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.25■□□□□ 0.99
Hoxc9P09633 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.25■□□□□ 0.99
Hoxc9P09633 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hoxc9P09633 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxc9P09633 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.24■□□□□ 0.99
Hoxc9P09633 Gm12260-201ENSMUST00000122447 411 ntBASIC21.24■□□□□ 0.99
Hoxc9P09633 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.24■□□□□ 0.99
Hoxc9P09633 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Hoxc9P09633 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Hoxc9P09633 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.24■□□□□ 0.99
Hoxc9P09633 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.24■□□□□ 0.99
Hoxc9P09633 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Hoxc9P09633 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hoxc9P09633 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hoxc9P09633 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms