Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Mir5122-201ENSMUST00000175004 89 ntBASIC11.67□□□□□ -0.54
Sh2d1aO88890 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Gm3375-201ENSMUST00000203929 796 ntBASIC11.67□□□□□ -0.54
Sh2d1aO88890 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Gm5417-201ENSMUST00000079706 384 ntBASIC11.67□□□□□ -0.54
Sh2d1aO88890 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sh2d1aO88890 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.67□□□□□ -0.54
Sh2d1aO88890 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm27000-201ENSMUST00000182943 842 ntBASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.66□□□□□ -0.54
Sh2d1aO88890 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.66□□□□□ -0.54
Sh2d1aO88890 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.66□□□□□ -0.54
Sh2d1aO88890 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.65□□□□□ -0.54
Sh2d1aO88890 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2d1aO88890 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2d1aO88890 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2d1aO88890 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2d1aO88890 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Sh2d1aO88890 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.65□□□□□ -0.55
Sh2d1aO88890 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms