Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.71□□□□□ -0.06
OtpO09113 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
OtpO09113 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.7□□□□□ -0.06
OtpO09113 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.7□□□□□ -0.06
OtpO09113 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
OtpO09113 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
OtpO09113 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.7□□□□□ -0.06
OtpO09113 Gm30025-201ENSMUST00000218555 728 ntBASIC14.7□□□□□ -0.06
OtpO09113 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
OtpO09113 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
OtpO09113 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
OtpO09113 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
OtpO09113 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
OtpO09113 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
OtpO09113 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.69□□□□□ -0.06
OtpO09113 Gm11539-201ENSMUST00000119837 557 ntBASIC14.69□□□□□ -0.06
OtpO09113 Gm13436-201ENSMUST00000120418 567 ntBASIC14.69□□□□□ -0.06
OtpO09113 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.69□□□□□ -0.06
OtpO09113 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
OtpO09113 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.69□□□□□ -0.06
OtpO09113 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OtpO09113 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
OtpO09113 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.68□□□□□ -0.06
OtpO09113 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.68□□□□□ -0.06
OtpO09113 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.68□□□□□ -0.06
OtpO09113 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.68□□□□□ -0.06
OtpO09113 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.68□□□□□ -0.06
OtpO09113 Gm7370-201ENSMUST00000219471 767 ntBASIC14.68□□□□□ -0.06
OtpO09113 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
OtpO09113 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
OtpO09113 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
OtpO09113 Phf7-203ENSMUST00000226565 1971 ntBASIC14.67□□□□□ -0.06
OtpO09113 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
OtpO09113 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
OtpO09113 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.67□□□□□ -0.06
OtpO09113 Gm27463-201ENSMUST00000183569 57 ntBASIC14.67□□□□□ -0.06
OtpO09113 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OtpO09113 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms