Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.65■□□□□ 0.42
Usp35M0QWN7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Usp35M0QWN7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Usp35M0QWN7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp35M0QWN7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Usp35M0QWN7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.63■□□□□ 0.41
Usp35M0QWN7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp35M0QWN7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Mir3081-201ENSMUST00000175305 84 ntBASIC17.62■□□□□ 0.41
Usp35M0QWN7 Gm27742-201ENSMUST00000184667 60 ntBASIC17.62■□□□□ 0.41
Usp35M0QWN7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Gm45328-201ENSMUST00000210942 917 ntBASIC17.62■□□□□ 0.41
Usp35M0QWN7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp35M0QWN7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp35M0QWN7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.61■□□□□ 0.41
Usp35M0QWN7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Gm27357-201ENSMUST00000183754 135 ntBASIC17.61■□□□□ 0.41
Usp35M0QWN7 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.61■□□□□ 0.41
Usp35M0QWN7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.61■□□□□ 0.41
Usp35M0QWN7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp35M0QWN7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp35M0QWN7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms