Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.77■□□□□ 0.76
NpcdF8VQB8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.77■□□□□ 0.75
NpcdF8VQB8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NpcdF8VQB8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
NpcdF8VQB8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.76■□□□□ 0.75
NpcdF8VQB8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.76■□□□□ 0.75
NpcdF8VQB8 Chchd1-203ENSMUST00000224633 557 ntBASIC19.76■□□□□ 0.75
NpcdF8VQB8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NpcdF8VQB8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.75■□□□□ 0.75
NpcdF8VQB8 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.75■□□□□ 0.75
NpcdF8VQB8 Gm11025-201ENSMUST00000140773 466 ntBASIC19.75■□□□□ 0.75
NpcdF8VQB8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.75■□□□□ 0.75
NpcdF8VQB8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NpcdF8VQB8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.75■□□□□ 0.75
NpcdF8VQB8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.74■□□□□ 0.75
NpcdF8VQB8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.74■□□□□ 0.75
NpcdF8VQB8 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.74■□□□□ 0.75
NpcdF8VQB8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.74■□□□□ 0.75
NpcdF8VQB8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NpcdF8VQB8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Mir3113-201ENSMUST00000175478 76 ntBASIC19.73■□□□□ 0.75
NpcdF8VQB8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.73■□□□□ 0.75
NpcdF8VQB8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.73■□□□□ 0.75
NpcdF8VQB8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NpcdF8VQB8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Gm7506-201ENSMUST00000207758 815 ntBASIC19.72■□□□□ 0.75
NpcdF8VQB8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NpcdF8VQB8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.72■□□□□ 0.75
NpcdF8VQB8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NpcdF8VQB8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.71■□□□□ 0.75
NpcdF8VQB8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.71■□□□□ 0.75
NpcdF8VQB8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms