Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.39□□□□□ -0.43
Col6a5A6H584 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.39□□□□□ -0.43
Col6a5A6H584 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm43006-201ENSMUST00000197702 1602 ntBASIC12.39□□□□□ -0.43
Col6a5A6H584 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm27300-201ENSMUST00000184085 97 ntBASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm27335-201ENSMUST00000184758 97 ntBASIC12.39□□□□□ -0.43
Col6a5A6H584 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.39□□□□□ -0.43
Col6a5A6H584 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a5A6H584 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a5A6H584 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a5A6H584 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a5A6H584 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a5A6H584 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.38□□□□□ -0.43
Col6a5A6H584 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a5A6H584 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a5A6H584 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col6a5A6H584 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a5A6H584 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a5A6H584 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.38□□□□□ -0.43
Col6a5A6H584 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.38□□□□□ -0.43
Col6a5A6H584 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.38□□□□□ -0.43
Col6a5A6H584 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a5A6H584 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Gm9794-201ENSMUST00000202370 423 ntBASIC12.37□□□□□ -0.43
Col6a5A6H584 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a5A6H584 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a5A6H584 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col6a5A6H584 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms