Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Gm15375-201ENSMUST00000119510 849 ntBASIC16.76■□□□□ 0.27
Gm5640A3KG49 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gm5640A3KG49 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm5640A3KG49 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.75■□□□□ 0.27
Gm5640A3KG49 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gm5640A3KG49 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5640A3KG49 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5640A3KG49 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms