Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Sybu-209ENSMUST00000228639 4113 ntBASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-27A0A0G2JF28 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm10129-202ENSMUST00000193100 1316 ntBASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Mir7075-201ENSMUST00000184187 82 ntBASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Gm38285-201ENSMUST00000192928 922 ntBASIC10.35□□□□□ -0.75
Igkv8-27A0A0G2JF28 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms