Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm11927-201ENSMUST00000118472 759 ntBASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.85□□□□□ -0.35
Trbv13-3A0A0B4J1H2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms