Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm25016-201ENSMUST00000158399 131 ntBASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbc1A0A0A6YWV4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbc1A0A0A6YWV4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm5587-201ENSMUST00000206270 674 ntBASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbc1A0A0A6YWV4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.1■□□□□ 0.01
Trbc1A0A0A6YWV4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms