Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Gm715-201ENSMUST00000117865 831 ntBASIC13.5□□□□□ -0.25
Trav18A0A075B656 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Gm3375-201ENSMUST00000203929 796 ntBASIC13.5□□□□□ -0.25
Trav18A0A075B656 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.5□□□□□ -0.25
Trav18A0A075B656 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav18A0A075B656 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.49□□□□□ -0.25
Trav18A0A075B656 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.49□□□□□ -0.25
Trav18A0A075B656 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trav18A0A075B656 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.48□□□□□ -0.25
Trav18A0A075B656 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.48□□□□□ -0.25
Trav18A0A075B656 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav18A0A075B656 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms