Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Gm5264-201ENSMUST00000190584 848 ntBASIC15.06■□□□□ 0
Trav8n-2A0A075B633 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.06■□□□□ 0
Trav8n-2A0A075B633 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8n-2A0A075B633 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav8n-2A0A075B633 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav8n-2A0A075B633 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav8n-2A0A075B633 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Gm12497-201ENSMUST00000138778 237 ntBASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Psmb5-202ENSMUST00000227257 622 ntBASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8n-2A0A075B633 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Gm15467-201ENSMUST00000120582 445 ntBASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8n-2A0A075B633 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8n-2A0A075B633 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav8n-2A0A075B633 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms