Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC115621.1-201ENST00000604653 858 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AP003392.5-201ENST00000607857 415 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AP005137.2-201ENST00000609238 400 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC107075.1-201ENST00000613695 314 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SNORD35B-201ENST00000363660 87 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SNORD74.4-201ENST00000364129 80 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 RNU6-413P-201ENST00000384115 107 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 RSL24D1P4-201ENST00000400938 484 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SFR1P1-201ENST00000403720 688 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 MIR1193-201ENST00000408109 78 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 SNORA11C-201ENST00000408532 129 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 RN7SKP263-201ENST00000411194 309 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL031736.2-201ENST00000426573 787 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL009174.1-201ENST00000426577 416 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 USP9YP11-201ENST00000427537 717 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL117339.2-201ENST00000430475 180 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL358472.1-201ENST00000431295 329 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 GTF2IP7-202ENST00000436677 309 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL162151.2-201ENST00000448875 158 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 RPL5P32-201ENST00000454085 879 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 NECAP1P2-201ENST00000455668 727 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC146944.2-203ENST00000502493 354 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC105313.1-201ENST00000509121 353 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC117522.2-201ENST00000510049 657 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC139495.1-202ENST00000513164 354 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 RNU7-143P-201ENST00000516781 65 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC023632.1-201ENST00000518463 375 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 HMGB1P23-201ENST00000518743 568 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC092747.2-201ENST00000545069 983 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC044913.1-201ENST00000557200 430 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 NIFKP8-201ENST00000560500 874 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 CYP4A43P-201ENST00000568156 121 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 MIR5708-201ENST00000579723 85 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL451044.1-201ENST00000604867 238 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 MIR432-201ENST00000606207 94 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AL360219.1-201ENST00000610230 366 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC026422.1-201ENST00000623961 452 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AP005264.7-201ENST00000625003 745 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 MTND4P31-201ENST00000425607 1343 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 NOL8P1-201ENST00000508336 3529 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 AC104454.1-201ENST00000421341 1401 ntBASIC4.38□□□□□ -1.71
SNX9Q9Y5X1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 AL133412.1-201ENST00000380194 2992 ntBASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 SNORA60-201ENST00000362396 134 ntBASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 RNA5SP283-201ENST00000365604 119 ntBASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 RNU6-628P-201ENST00000410675 107 ntBASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 PGBD4P8-201ENST00000412993 562 ntBASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 AC114814.2-201ENST00000419195 485 ntBASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX9Q9Y5X1 OR5BE1P-201ENST00000425977 939 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms