Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 ARL2BPP5-201ENST00000523141 481 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 LSM6P2-201ENST00000552208 177 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC120057.2-201ENST00000571520 271 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AL606834.3-201ENST00000602615 496 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC024933.1-201ENST00000608472 348 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC069200.1-201ENST00000609511 323 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AL353746.1-201ENST00000566293 6881 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL645568.2-201ENST00000432815 1337 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 MIR448-201ENST00000362131 111 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU6-525P-201ENST00000363685 104 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU6-619P-201ENST00000365146 108 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 RPL7P27-201ENST00000403775 720 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 MTCO3P31-201ENST00000405526 789 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 MIR1183-201ENST00000408856 89 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 MTND4P22-201ENST00000413116 1169 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL691449.1-201ENST00000426570 421 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC092634.2-201ENST00000428146 1010 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 snoU13.24-201ENST00000458998 104 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 RPL9P32-201ENST00000464118 620 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 RPS29P19-201ENST00000479709 171 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AF213884.1-201ENST00000488102 463 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC091860.1-201ENST00000505723 432 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC119751.4-201ENST00000507498 357 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 IGLVIV-53-201ENST00000520107 367 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC010376.1-201ENST00000522101 334 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 OR8I1P-201ENST00000529291 931 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC118942.1-201ENST00000529674 1035 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 OR4A45P-201ENST00000529954 901 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC122134.1-202ENST00000569111 1201 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC022655.2-201ENST00000577280 318 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AP001542.2-201ENST00000593141 364 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 BNIP3P39-201ENST00000601077 554 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 RPAP2P1-201ENST00000603626 1168 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL160290.3-201ENST00000604869 165 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC010201.1-201ENST00000605051 540 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL592436.1-201ENST00000605135 558 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC093673.2-201ENST00000609674 331 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC013437.2-201ENST00000639587 677 ntBASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA1Q9Y5H4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 AC116667.1-201ENST00000604855 2072 ntBASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHGA1Q9Y5H4 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms