Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 MTND4P31-201ENST00000425607 1343 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 OR1L1-202ENST00000373686 1083 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL136310.1-201ENST00000404926 654 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL590290.1-201ENST00000405336 380 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 RNU6-575P-201ENST00000411326 105 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 OR4K6P-201ENST00000416478 897 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC092447.3-201ENST00000426027 686 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 Z73417.1-201ENST00000447373 778 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC004022.1-201ENST00000447766 1066 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 MRPL35P4-201ENST00000453682 566 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 USP9YP25-201ENST00000457708 443 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC006463.2-201ENST00000473326 348 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC069528.1-202ENST00000482888 637 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC084024.2-201ENST00000503480 791 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC023632.1-201ENST00000518463 375 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC010306.1-201ENST00000523223 1117 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 OR4A2P-201ENST00000527276 913 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC124293.1-201ENST00000530034 493 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC044913.1-201ENST00000557200 430 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 MIR5708-201ENST00000579723 85 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 MIR4425-201ENST00000580572 84 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 MIR4270-201ENST00000581799 70 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC245036.5-201ENST00000596330 847 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL020997.3-201ENST00000602843 359 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL161729.3-201ENST00000603533 673 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL365503.1-201ENST00000605247 905 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AL138478.1-201ENST00000612252 832 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 AC092608.3-201ENST00000625017 386 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 LINC02211-204ENST00000642024 1070 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NDE1Q9NXR1 MTCO1P6-201ENST00000481192 1384 ntBASIC3.75□□□□□ -1.81
NDE1Q9NXR1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AL590704.1-201ENST00000402856 794 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 SNORA57.3-201ENST00000411095 141 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 VPS26BP1-201ENST00000417155 755 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AL356320.2-201ENST00000417263 507 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RPS24P8-201ENST00000431490 402 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AL138878.2-201ENST00000440581 1241 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RPL21P133-201ENST00000443666 476 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 PTENP1-201ENST00000447117 1215 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 CEACAMP4-201ENST00000457676 421 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC096992.1-201ENST00000459808 709 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RN7SL481P-201ENST00000477764 299 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RN7SL604P-201ENST00000492589 296 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 RN7SKP60-201ENST00000516985 239 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AL139174.1-201ENST00000531489 886 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC023538.1-201ENST00000534576 736 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 TRAV8-5-201ENST00000537369 341 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC091516.1-201ENST00000549191 703 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC009097.3-201ENST00000563557 1018 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC068790.7-201ENST00000602347 528 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC091057.2-201ENST00000602594 792 ntBASIC3.74□□□□□ -1.81
NDE1Q9NXR1 AC107952.2-201ENST00000606048 486 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms