Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SNORA27.3-201ENST00000364937 134 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 MIR591-201ENST00000385290 95 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RPL31P2-201ENST00000413849 377 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 XKRYP4-201ENST00000414395 483 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AL356968.1-201ENST00000416622 474 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC244453.4-201ENST00000419150 388 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 GLRXP1-201ENST00000423261 334 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AL035458.1-201ENST00000433096 585 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC073063.1-201ENST00000434352 607 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 MTND2P21-201ENST00000436242 1042 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 HSPD1P21-201ENST00000436541 245 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 ARL5AP2-201ENST00000444698 533 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AL359073.1-201ENST00000448036 403 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RPL29P29-201ENST00000448725 423 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 XKRYP5-201ENST00000449659 483 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RPL37P3-201ENST00000456825 293 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RPL7P15-201ENST00000461190 712 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AL035404.1-201ENST00000497982 568 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RNU6-760P-201ENST00000516078 97 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RNU1-45P-201ENST00000517191 141 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 OR4R3P-201ENST00000525084 838 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC011468.4-201ENST00000603942 409 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC245389.2-201ENST00000616023 576 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC243756.2-201ENST00000618406 463 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 AC242843.1-201ENST00000618702 573 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.39□□□□□ -1.87
TREX1Q9NSU2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.39□□□□□ -1.87
TREX1Q9NSU2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 DDX6P1-205ENST00000441966 1436 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 RNA5SP295-201ENST00000362655 121 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AL589655.1-201ENST00000405398 482 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AP000567.1-201ENST00000406413 156 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 HNRNPDP2-201ENST00000406475 478 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 RPL21P112-201ENST00000434403 463 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 TPTE2P6-202ENST00000445572 1007 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AL672167.3-201ENST00000465951 960 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 MTCO1P49-201ENST00000523429 802 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 PDCL2P2-201ENST00000533651 189 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 OR8L1P-201ENST00000534005 955 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC244258.1-201ENST00000637553 1071 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 CR383658.2-201ENST00000547576 1525 ntBASIC3.38□□□□□ -1.87
TREX1Q9NSU2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
TREX1Q9NSU2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MIR554-201ENST00000384874 96 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC025750.1-201ENST00000399891 379 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TREX1Q9NSU2 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 LIPT1P1-201ENST00000415870 1186 ntBASIC3.37□□□□□ -1.87
TREX1Q9NSU2 MTND2P16-201ENST00000419987 799 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms