Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 PSMA6P4-201ENST00000603247 718 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC008277.2-201ENST00000605196 797 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC126177.8-201ENST00000618339 1015 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC068724.3-201ENST00000625906 87 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 ATE1-AS1-202ENST00000636460 506 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AP000756.2-201ENST00000624168 2567 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC005332.5-201ENST00000591222 2919 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AL022578.1-201ENST00000439330 1433 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 RN7SKP227-201ENST00000364445 330 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 Y_RNA.295-201ENST00000364918 102 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 RNU2-65P-201ENST00000410162 185 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AF186996.5-201ENST00000418098 904 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC092634.6-201ENST00000418558 192 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 TIMM9P3-201ENST00000428659 274 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 MTCYBP45-201ENST00000435243 565 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AL450023.3-201ENST00000440592 271 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 RPL12P20-201ENST00000475538 479 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 RN7SL817P-201ENST00000480777 288 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC010350.1-201ENST00000504908 231 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC021678.1-201ENST00000505195 936 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 ARL4AP2-201ENST00000507378 601 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 MTCO1P35-201ENST00000515270 228 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 RNA5SP216-201ENST00000516111 123 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC022878.1-201ENST00000530684 149 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 OR5AL2P-201ENST00000532185 920 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 OR8L1P-201ENST00000534005 955 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 BNIP3P5-201ENST00000562290 498 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 HMGB1P33-201ENST00000563485 527 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC009977.1-201ENST00000586015 570 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC044792.1-201ENST00000593294 196 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC103792.1-201ENST00000603591 919 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AL020991.1-201ENST00000612314 373 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 AC231657.1-201ENST00000624313 397 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 MIR6830-201ENST00000636015 70 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM7Q9NR12 STX3-208ENST00000641815 3236 ntBASIC5.59□□□□□ -1.52
PDLIM7Q9NR12 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 Y_RNA.89-201ENST00000363031 102 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 RNU6-534P-201ENST00000364877 106 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 U3.22-201ENST00000391120 215 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 RN7SKP16-201ENST00000410180 299 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 NUP35P2-201ENST00000416748 943 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 AC234779.1-201ENST00000425910 285 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 AC073069.1-201ENST00000428657 441 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 AL358934.1-201ENST00000432346 324 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 NF1P3-201ENST00000457709 450 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 RPL7AP28-201ENST00000464513 571 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 OR52A4P-201ENST00000472867 958 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 ACTR3P3-201ENST00000480448 893 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 RNF138P1-201ENST00000502765 546 ntBASIC5.58□□□□□ -1.52
PDLIM7Q9NR12 SLC25A15P5-201ENST00000508033 253 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms