Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 HMGB1P12-201ENST00000438594 598 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA71B-202ENST00000439232 272 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC233982.1-201ENST00000451247 436 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 OR9M1P-201ENST00000459641 921 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC068587.1-201ENST00000483613 781 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 PRELID3BP5-201ENST00000508612 460 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC108064.1-201ENST00000513791 460 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA48.9-201ENST00000516419 162 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC022695.1-201ENST00000522089 237 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AP003717.3-201ENST00000544832 1180 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC233266.2-201ENST00000567067 528 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC008687.2-201ENST00000597865 520 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC011468.4-201ENST00000603942 409 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC112230.1-201ENST00000604342 547 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 FRG1HP-204ENST00000617940 757 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 PLCE1P1-201ENST00000622094 305 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RNU6-883P-201ENST00000384597 107 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 DSTNP4-201ENST00000399472 474 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 PPIAP31-201ENST00000405422 495 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP31-201ENST00000411144 127 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RN7SKP263-201ENST00000411194 309 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 MTCYBP24-201ENST00000420387 1106 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL049610.1-201ENST00000423374 372 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC091390.1-201ENST00000433904 331 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC074367.1-201ENST00000438685 1125 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC007000.2-201ENST00000442564 487 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 VN1R105P-201ENST00000486595 910 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 HMGB1P38-201ENST00000490557 577 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RN7SL323P-201ENST00000494712 295 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL139099.1-201ENST00000497398 403 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 HMGB3P15-201ENST00000507326 574 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 FABP5P12-201ENST00000515543 389 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RN7SKP244-201ENST00000516513 307 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RN7SKP289-201ENST00000517244 295 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 OR4R3P-201ENST00000525084 838 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 MTCYBP41-201ENST00000528913 1123 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 CYCSP30-201ENST00000546447 172 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC004024.1-201ENST00000549244 247 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC010735.1-201ENST00000567305 1026 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC053481.4-201ENST00000583164 216 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC091488.1-201ENST00000604239 660 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AP001033.2-201ENST00000609701 1003 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR6810-201ENST00000622701 70 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP196-201ENST00000625967 102 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 FRG1DP-201ENST00000635586 771 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC017104.5-201ENST00000637647 639 ntBASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCNB1IP1Q9NPC3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms