Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 RPS3AP46-201ENST00000448352 682 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AL136097.1-201ENST00000456945 913 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 RAB9BP1-201ENST00000519581 626 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 NDUFB9P3-201ENST00000521269 501 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 C1GALT1P3-201ENST00000522049 819 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 TOMM20P2-201ENST00000540082 421 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC023161.2-201ENST00000551218 780 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 ZNF971P-201ENST00000562068 1249 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC068313.1-201ENST00000604028 1008 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC112484.5-201ENST00000624189 228 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 AC132825.7-201ENST00000638744 335 ntBASIC4.42□□□□□ -1.7
UPF2Q9HAU5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPF2Q9HAU5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AL592437.2-201ENST00000421655 2434 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 SNORA62-201ENST00000365493 153 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 RNU6-185P-201ENST00000384421 107 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 SNORD65C-201ENST00000390962 71 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AL590704.1-201ENST00000402856 794 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 RN7SKP177-201ENST00000410567 355 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 MTATP6P20-201ENST00000414147 562 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AL356095.1-201ENST00000417217 199 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC068533.1-201ENST00000418542 415 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 FAR2P4-202ENST00000425399 584 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 ETF1P3-201ENST00000430422 1160 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 MTCO1P52-201ENST00000433928 531 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 RNU7-170P-201ENST00000459303 61 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 RN7SKP141-201ENST00000516167 338 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 OR10V3P-201ENST00000525712 725 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 OR8K4P-201ENST00000534608 872 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC011602.1-201ENST00000546484 331 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 MTCYBP23-201ENST00000558717 1102 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC234772.3-201ENST00000602277 528 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC006077.1-201ENST00000604746 343 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC019226.2-201ENST00000625973 424 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 OR52H1-202ENST00000641796 1061 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 ASNSP1-204ENST00000641977 1664 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPF2Q9HAU5 AC007656.2-201ENST00000624902 4547 ntBASIC4.41□□□□□ -1.7
UPF2Q9HAU5 U6.112-201ENST00000384129 70 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 RNU4-31P-201ENST00000384211 141 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AF228730.1-201ENST00000397972 663 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 U3.39-201ENST00000408569 239 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC013404.1-201ENST00000413068 249 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 XKRYP1-201ENST00000423438 492 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC092648.1-201ENST00000425870 423 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 XKRYP2-201ENST00000432915 492 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 RPL5P32-201ENST00000454085 879 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.4□□□□□ -1.71
UPF2Q9HAU5 SNORD11.1-201ENST00000459482 85 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 OR9M1P-201ENST00000459641 921 ntBASIC4.4□□□□□ -1.71
UPF2Q9HAU5 AC010401.1-201ENST00000463867 348 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms