Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC091515.1-201ENST00000548110 679 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC037471.2-201ENST00000564941 598 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 MIR4644-201ENST00000579929 84 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 MIR4276-201ENST00000584832 70 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC067852.4-201ENST00000590314 478 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC110741.2-201ENST00000605278 268 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL355802.4-201ENST00000607635 548 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 MIR7112-201ENST00000616126 65 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AP003072.4-201ENST00000624580 310 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC116563.2-201ENST00000624751 535 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 EXOC5P1-201ENST00000510543 1969 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 MIR23A-201ENST00000385245 73 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 MTCO1P52-201ENST00000433928 531 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 RPL34P26-201ENST00000445636 354 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 EXTL2P1-201ENST00000446218 416 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 RPL7P48-201ENST00000461513 746 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 SUMO1P1-201ENST00000497904 306 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC010285.3-201ENST00000511668 676 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 OR4R3P-201ENST00000525084 838 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 UBE2NP1-201ENST00000545592 458 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AL121576.1-201ENST00000556055 276 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC006557.5-201ENST00000603126 811 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 AC022149.2-201ENST00000621061 203 ntBASIC3.69□□□□□ -1.82
NXF3Q9H4D5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NXF3Q9H4D5 RNF6P1-201ENST00000444889 1784 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 MIR483-201ENST00000385070 76 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 RNU6-244P-201ENST00000391028 104 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 Z99755.1-201ENST00000414048 380 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 USP9YP7-201ENST00000436723 430 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 CBX1P4-201ENST00000439415 457 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 XKRY2-201ENST00000442362 1093 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 AL353718.1-201ENST00000451028 517 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 USP9YP32-201ENST00000452432 430 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 SNORD108-201ENST00000459332 71 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 RPL7P38-201ENST00000488396 739 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 SNX5P1-201ENST00000505757 1041 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 Vault.1-201ENST00000516474 102 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 RNU6-467P-201ENST00000517027 110 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 CR589904.2-201ENST00000612533 440 ntBASIC3.68□□□□□ -1.82
NXF3Q9H4D5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NXF3Q9H4D5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 SNORD115-48-201ENST00000364764 76 ntBASIC3.67□□□□□ -1.82
NXF3Q9H4D5 Z86062.1-201ENST00000406773 777 ntBASIC3.67□□□□□ -1.82
NXF3Q9H4D5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.67□□□□□ -1.82
NXF3Q9H4D5 RANP4-201ENST00000413361 655 ntBASIC3.67□□□□□ -1.82
NXF3Q9H4D5 AL357078.2-201ENST00000416486 427 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms