Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC007685.1-201ENST00000329806 452 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC234772.1-201ENST00000377927 937 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AP002088.1-201ENST00000382740 395 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 RNU6-1151P-201ENST00000384684 107 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 MCTS2P-201ENST00000394552 546 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 DNAJC19P6-201ENST00000401853 280 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 SDCBPP2-201ENST00000424643 885 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC105402.2-201ENST00000438503 358 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 RPL21P89-201ENST00000444021 467 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AP000893.1-201ENST00000474462 794 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 ARL2BPP6-201ENST00000512757 439 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AF279873.1-201ENST00000523393 313 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC019227.1-201ENST00000526902 510 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 ZNF971P-201ENST00000562068 1249 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 BNIP3P38-201ENST00000601117 544 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AL365503.1-201ENST00000605247 905 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC018754.1-201ENST00000607486 925 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC124016.2-201ENST00000610058 665 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AL359535.1-201ENST00000612100 1087 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 MIR6875-201ENST00000617506 72 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 VN1R7P-201ENST00000619242 903 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 AC022149.2-201ENST00000621061 203 ntBASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDHD3Q9BSH5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AL645568.2-201ENST00000432815 1337 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 MIR30E-201ENST00000362104 92 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 RNU6-549P-201ENST00000384433 107 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 SNORA51.12-201ENST00000384448 134 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 RNU6-575P-201ENST00000411326 105 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 PRELID3BP11-201ENST00000414230 479 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AL807761.1-201ENST00000417622 171 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC009237.2-201ENST00000421358 284 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC092634.2-201ENST00000428146 1010 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 MRPS18BP2-201ENST00000434310 759 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 SNRPGP5-201ENST00000456003 220 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 RPL37P6-202ENST00000464216 403 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC010460.1-201ENST00000507087 466 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC110768.1-201ENST00000509222 400 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC110792.2-201ENST00000510278 224 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC093853.1-201ENST00000515689 483 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 SNORA70.14-201ENST00000516205 110 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 HIGD1AP6-201ENST00000521833 279 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC007991.1-201ENST00000522680 631 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 MTND2P26-201ENST00000528255 1029 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 TOMM20P2-201ENST00000540082 421 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 CYCSP30-201ENST00000546447 172 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 TGIF1P1-201ENST00000558095 802 ntBASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.01□□□□□ -1.93
HDHD3Q9BSH5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms