Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 OR8G5-201ENST00000524943 1041 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AP004371.1-201ENST00000525240 214 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 CBX3P5-201ENST00000552017 521 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC063950.1-201ENST00000552036 308 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MTCYBP23-201ENST00000558717 1102 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC009101.1-201ENST00000568135 242 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC007599.1-201ENST00000568688 1174 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC141257.3-201ENST00000572906 215 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 VN1R79P-201ENST00000593540 513 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC007687.1-201ENST00000602704 304 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC012409.3-201ENST00000611343 981 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC073348.1-201ENST00000623002 331 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AL445363.3-201ENST00000623080 671 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC090772.4-201ENST00000623599 362 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MTND2P41-201ENST00000637599 773 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC116096.1-201ENST00000566804 2314 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 USP8P1-201ENST00000494673 3183 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 RNU6-989P-201ENST00000362756 107 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 RNU5D-1-201ENST00000363299 116 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 MIR1179-201ENST00000408703 91 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 GTF2IP23-201ENST00000423746 351 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 ELOCP13-201ENST00000443934 329 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 EXTL2P1-201ENST00000446218 416 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 MTCYBP11-201ENST00000447254 1109 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 EXOSC3P1-201ENST00000448649 500 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 RPL23AP81-201ENST00000455252 467 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 RPL5P24-201ENST00000463742 885 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 PLGLA-201ENST00000465668 449 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 RPS29P19-201ENST00000479709 171 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AC010460.2-201ENST00000509054 677 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 OR10V3P-201ENST00000525712 725 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AC103881.1-201ENST00000603476 538 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 uc_338.13-201ENST00000618243 179 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 MIR7703-201ENST00000620784 77 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 CYP3A51P-201ENST00000633513 256 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 MARK2P15-201ENST00000432204 2186 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS33AQ96AX1 AL353746.1-201ENST00000566293 6881 ntBASIC4.01□□□□□ -1.77
VPS33AQ96AX1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC106871.1-201ENST00000568324 3102 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS33AQ96AX1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AC007685.1-201ENST00000329806 452 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 RNU6-216P-201ENST00000363282 104 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 RNA5SP322-201ENST00000363617 119 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
VPS33AQ96AX1 RNU1-89P-201ENST00000384592 164 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS33AQ96AX1 MIR550A3-201ENST00000390735 95 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AL138880.1-201ENST00000405824 642 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 SNORA11F-201ENST00000408237 128 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AIMP1P1-201ENST00000418670 937 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AC106883.1-201ENST00000418805 562 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AL157831.1-201ENST00000426134 473 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AC068287.1-201ENST00000430283 295 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4□□□□□ -1.77
VPS33AQ96AX1 RPS20P24-201ENST00000457473 361 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4□□□□□ -1.77
VPS33AQ96AX1 UBE2V1P12-201ENST00000503954 474 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4□□□□□ -1.77
VPS33AQ96AX1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS33AQ96AX1 RNU2-58P-201ENST00000516403 183 ntBASIC4□□□□□ -1.77
VPS33AQ96AX1 IGLVIV-65-201ENST00000517313 360 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms