Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 SETP5-201ENST00000437270 562 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 MIR2276-201ENST00000516886 89 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AC103783.1-201ENST00000520506 373 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 NRBF2P5-201ENST00000603087 788 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 UBE2V2P1-201ENST00000434717 398 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 BX276092.4-201ENST00000452056 248 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 PTGES3P3-201ENST00000511479 482 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AP000919.1-202ENST00000581139 1264 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 AC093775.1-201ENST00000624154 1868 ntBASIC3.23□□□□□ -1.89
SHROOM3Q8TF72 CDC27P2-201ENST00000425026 1922 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 MTND5P24-201ENST00000438892 1767 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 Y_RNA.62-201ENST00000362840 99 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AL138885.1-201ENST00000405921 675 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 TPTE2P1-204ENST00000435256 593 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 NECAP1P2-201ENST00000455668 727 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 RN7SKP5-201ENST00000517045 272 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC234775.3-201ENST00000564612 656 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC093311.1-201ENST00000506586 2021 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SHROOM3Q8TF72 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 BTF3P9-201ENST00000418784 283 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 EXTL2P1-201ENST00000446218 416 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 RN7SL432P-201ENST00000484057 298 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC093755.1-201ENST00000512950 1023 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC008885.1-201ENST00000514930 301 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 RNU6-551P-201ENST00000516661 103 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC008676.3-201ENST00000521237 435 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 COX6B1P6-201ENST00000522347 255 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 OR2AS2P-201ENST00000606902 342 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 AC010149.2-201ENST00000637608 315 ntBASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.89
SHROOM3Q8TF72 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 HSPA8P17-201ENST00000427029 1382 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC062016.1-201ENST00000355719 319 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 TRBV8-2-201ENST00000475637 270 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC091917.2-201ENST00000505002 744 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AP001960.1-201ENST00000506494 658 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms