Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 RNU6-298P-201ENST00000390888 96 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC073264.1-201ENST00000411508 416 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 PSMA2P3-201ENST00000429685 675 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC068287.1-201ENST00000430283 295 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 SEPT14P24-201ENST00000447236 180 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AL050341.1-201ENST00000447743 313 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 U3.44-201ENST00000458938 192 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 RPS4XP13-201ENST00000483219 789 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 NCOR1P1-202ENST00000486162 291 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AK3P4-201ENST00000504283 583 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 RPL12P22-201ENST00000519073 490 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 OR8G5-201ENST00000524943 1041 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC118942.1-201ENST00000529674 1035 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 CYCSP29-201ENST00000533731 318 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AL390816.3-201ENST00000604527 1066 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC084824.4-201ENST00000620106 731 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 AC091953.3-201ENST00000623220 236 ntBASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC71LQ8N9Z2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CCDC71LQ8N9Z2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
CCDC71LQ8N9Z2 AL645568.2-201ENST00000432815 1337 ntBASIC3.21□□□□□ -1.89
CCDC71LQ8N9Z2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
CCDC71LQ8N9Z2 PRO1804-201ENST00000623780 2050 ntBASIC3.21□□□□□ -1.89
CCDC71LQ8N9Z2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RNA5SP443-201ENST00000363083 132 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RNA5SP399-201ENST00000364003 117 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-1243P-201ENST00000364028 107 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 MIR607-201ENST00000385241 96 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 ENSAP1-201ENST00000392855 326 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL133270.1-201ENST00000402635 279 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPL7P27-201ENST00000403775 720 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 GSTA8P-201ENST00000404253 637 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPS16P5-201ENST00000406501 404 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RN7SKP278-201ENST00000410504 342 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPP40P1-201ENST00000426762 456 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPL21P112-201ENST00000434403 463 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC002542.1-201ENST00000440683 193 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL662791.1-201ENST00000441992 928 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPL7P59-201ENST00000447700 943 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPL29P29-201ENST00000448725 423 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC092754.2-201ENST00000463506 460 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RPL31P13-201ENST00000484151 370 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL132838.2-201ENST00000492041 314 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 PRELID3BP6-201ENST00000503839 571 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC111000.3-201ENST00000508057 576 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC119751.1-201ENST00000513357 765 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA19.3-201ENST00000516165 130 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RN7SKP157-201ENST00000516174 282 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms