Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 SNORA5A-201ENST00000384111 134 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 MIR1251-201ENST00000408552 70 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 RNU2-37P-201ENST00000410695 177 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 BX664727.1-201ENST00000416024 466 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 MTND2P16-201ENST00000419987 799 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC244098.2-201ENST00000422068 99 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 MTATP6P11-201ENST00000428071 670 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC008379.1-201ENST00000463655 464 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 RN7SL271P-201ENST00000487601 295 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC121161.1-201ENST00000510606 652 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC098483.2-201ENST00000603158 454 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 BNIP3P11-201ENST00000603878 563 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC015967.1-201ENST00000619893 476 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AL139089.1-201ENST00000620372 975 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AF001550.2-201ENST00000636643 217 ntBASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.97□□□□□ -1.77
HDDC3Q8N4P3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 MIR607-201ENST00000385241 96 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 MT-TC-201ENST00000387405 66 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 SNORA3.3-201ENST00000408712 125 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 RPL7AP73-201ENST00000413490 353 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC068533.1-201ENST00000418542 415 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 MOB1AP2-201ENST00000446060 614 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 RPL32P14-201ENST00000463196 378 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC010307.1-201ENST00000467206 836 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 RN7SL585P-201ENST00000470538 280 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC006517.1-201ENST00000480485 328 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC008628.1-201ENST00000508663 265 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC104057.1-201ENST00000515547 497 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 RNU6-352P-201ENST00000516908 107 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 OR8K4P-201ENST00000534608 872 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC092470.1-201ENST00000546187 132 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 YPEL5P3-201ENST00000547227 352 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 CR383656.14-201ENST00000551951 406 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 NIFKP8-201ENST00000560500 874 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC107954.1-201ENST00000565906 727 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC124283.4-201ENST00000581815 456 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 OR1AB1P-201ENST00000585564 761 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AP004247.3-201ENST00000608682 624 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AL512506.1-201ENST00000613918 449 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC095038.2-201ENST00000621464 1070 ntBASIC3.96□□□□□ -1.78
HDDC3Q8N4P3 AC097372.4-201ENST00000625025 466 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms