Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ASNSP1-201ENST00000518311 1939 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL592182.3-201ENST00000642132 3304 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 OR4A15-201ENST00000314706 1035 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RNU1-132P-201ENST00000364300 164 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RNA5SP366-201ENST00000365454 123 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RNU1-63P-201ENST00000383902 164 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 SNORD116-2-201ENST00000384274 95 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 SNORD116-6-201ENST00000384711 96 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MIR649-201ENST00000384843 97 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL590084.2-201ENST00000401481 382 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RNU2-28P-201ENST00000410457 189 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL160275.2-201ENST00000412010 394 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC011233.1-201ENST00000422812 283 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL365203.2-201ENST00000423444 196 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 SDCBPP2-201ENST00000424643 885 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC096632.1-201ENST00000427395 310 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RPL21P91-201ENST00000429231 479 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 VDAC1P6-201ENST00000430062 855 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RPL23AP52-201ENST00000439311 478 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTND2P20-201ENST00000440805 661 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTCYBP3-201ENST00000445588 1137 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL606662.1-201ENST00000445763 553 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTCO1P48-201ENST00000448024 1096 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 snoU13.7-201ENST00000459220 104 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RPS26P28-201ENST00000470806 348 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC087879.1-201ENST00000474343 374 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC041039.1-201ENST00000485656 536 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC091167.1-201ENST00000492017 396 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RPF2P2-201ENST00000504693 896 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTATP6P22-201ENST00000507369 598 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTCO1P35-201ENST00000515270 228 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 RNA5SP446-201ENST00000515955 82 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 Y_RNA.688-201ENST00000516565 95 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 TRAV8-5-201ENST00000537369 341 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC090502.2-201ENST00000549267 280 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 SULT1C2P1-202ENST00000562418 459 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTCYBP28-201ENST00000566728 1132 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MTND6P33-201ENST00000571794 183 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL121834.1-201ENST00000572284 509 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 ISCA1P3-201ENST00000577104 373 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MIR4504-201ENST00000577413 92 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC013444.2-201ENST00000603317 787 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC069304.2-201ENST00000605154 435 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 HSPE1P14-201ENST00000605812 302 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC006270.3-201ENST00000605967 1036 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MIR3653-201ENST00000625572 110 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC117529.2-201ENST00000512159 2068 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC012321.1-201ENST00000561622 1588 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.05□□□□□ -1.76
BEST3Q8N1M1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 MTND4P34-201ENST00000572715 1371 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 AP000526.1-201ENST00000603308 1388 ntBASIC4.04□□□□□ -1.76
BEST3Q8N1M1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.04□□□□□ -1.76
BEST3Q8N1M1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms