Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC012020.1-201ENST00000624541 1728 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC116096.1-201ENST00000566804 2314 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RNA5SP388-201ENST00000362584 119 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RNA5SP366-201ENST00000365454 123 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MIR607-201ENST00000385241 96 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 SNORD65.1-201ENST00000390889 71 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RNU6-821P-201ENST00000390995 107 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MTND4LP20-201ENST00000402379 270 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL356967.1-201ENST00000406305 431 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RNA5SP56-201ENST00000410277 118 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 OR4K6P-201ENST00000416478 897 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MRPS36P1-201ENST00000421291 307 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RAC1P8-201ENST00000427086 527 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL035410.1-201ENST00000427409 427 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC011998.1-201ENST00000433403 117 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RPS20P24-201ENST00000457473 361 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 snoU13.3-201ENST00000459441 104 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RN7SL385P-201ENST00000468873 276 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RN7SL303P-201ENST00000469773 251 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC108734.3-201ENST00000481241 1165 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC091167.1-201ENST00000492017 396 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 PRELID3BP6-201ENST00000503839 571 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC025554.1-201ENST00000505641 188 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 PRELID3BP5-201ENST00000508612 460 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC093752.1-206ENST00000511823 336 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RNA5SP519-201ENST00000516480 119 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RNU6-1261P-201ENST00000517194 104 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC087808.1-201ENST00000520501 361 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC090281.1-201ENST00000523019 276 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC135001.1-201ENST00000544546 283 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC007599.1-201ENST00000568688 1174 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MIR4509-3-201ENST00000578671 94 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MIR4509-2-201ENST00000583920 94 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MIR3138-201ENST00000585238 82 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC069431.2-201ENST00000604149 1099 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC006023.2-201ENST00000609916 167 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC009237.15-201ENST00000610252 501 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MIR4509-1-201ENST00000618224 94 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AL359715.5-201ENST00000623431 443 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 AP005901.5-201ENST00000545779 1796 ntBASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NHLRC1Q6VVB1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 AC126755.2-208ENST00000327792 462 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 AC138969.1-213ENST00000331436 462 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 SNORA51.6-201ENST00000384151 125 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 MIR3074-201ENST00000384885 81 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 HIGD1AP12-201ENST00000427832 281 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 AL138799.3-201ENST00000438968 350 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 AC093155.1-201ENST00000440164 826 ntBASIC3.75□□□□□ -1.81
NHLRC1Q6VVB1 MTCYBP11-201ENST00000447254 1109 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms