Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RN7SL812P-201ENST00000493791 279 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC096751.1-202ENST00000502691 1067 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AK3P4-201ENST00000504283 583 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC113430.1-201ENST00000506872 718 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 RPL37P25-201ENST00000507308 276 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC104108.1-201ENST00000509930 412 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC010285.3-201ENST00000511668 676 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 IGJP1-201ENST00000522682 475 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AP001317.1-201ENST00000531194 960 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 OR5AN2P-201ENST00000534535 896 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC018552.1-201ENST00000562099 811 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC087481.2-201ENST00000565492 330 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC083899.3-201ENST00000603413 594 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC009220.3-201ENST00000604318 586 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC092354.1-201ENST00000606057 376 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC011472.4-201ENST00000615848 491 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AL136981.2-201ENST00000617319 734 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 AC119674.1-212ENST00000641155 993 ntBASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF549Q6P9A3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.73
ZNF549Q6P9A3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AL136131.1-201ENST00000406079 803 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 SNORA11F-201ENST00000408237 128 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC007899.1-201ENST00000412776 775 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 RPL30P16-201ENST00000419341 429 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MRPS36P1-201ENST00000421291 307 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 RPL7P29-201ENST00000437151 728 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 CDC27P1-201ENST00000445384 715 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 COX6CP18-201ENST00000448769 222 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 SUMO2P2-201ENST00000456482 255 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 RPS29P33-201ENST00000456717 146 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC037198.2-201ENST00000478845 733 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC007686.1-201ENST00000488511 463 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC104164.2-201ENST00000496953 495 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC108145.1-201ENST00000503770 153 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 RN7SKP31-201ENST00000516354 278 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 RNU6-405P-201ENST00000516637 110 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 DUXAP2-201ENST00000519198 589 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC087808.1-201ENST00000520501 361 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC016957.1-201ENST00000534895 309 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 TRAV8-5-201ENST00000537369 341 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AL109766.1-201ENST00000555080 552 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MTND1P15-201ENST00000579262 949 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 OR4K7P-201ENST00000580232 945 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MIR4715-201ENST00000584117 79 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MTCYBP22-201ENST00000603788 447 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC113403.1-201ENST00000604910 193 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AP001596.2-201ENST00000608410 312 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC138749.5-201ENST00000611461 208 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 MIR6820-201ENST00000611508 62 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC013476.2-201ENST00000614456 459 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 U6atac.1-201ENST00000616025 117 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.27□□□□□ -1.73
ZNF549Q6P9A3 AC009237.17-201ENST00000618111 748 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms