Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 MAPK10-303ENST00000641324 3959 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RNU6-623P-201ENST00000363143 105 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 Y_RNA.493-201ENST00000384422 102 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 Y_RNA.553-201ENST00000384670 102 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 U8.14-201ENST00000390843 143 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC136624.1-201ENST00000400791 413 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 MTCYBP36-201ENST00000404146 440 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RNA5SP56-201ENST00000410277 118 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RPL17P12-201ENST00000413391 526 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RAD23BP1-201ENST00000421404 1227 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 CFL1P1-202ENST00000432948 411 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 MTCO3P5-201ENST00000433620 714 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RPS29P9-201ENST00000440360 171 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 OR6K1P-201ENST00000456766 971 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 TPTE2P5-203ENST00000458118 728 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RN7SL174P-201ENST00000475578 289 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 OR2AO1P-201ENST00000476497 403 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RPS21P4-201ENST00000487122 248 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC093267.1-201ENST00000489176 961 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 TXNP6-201ENST00000510190 310 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC025881.1-201ENST00000518851 512 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 IGKV2-18-201ENST00000522607 343 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC079075.1-201ENST00000559543 878 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC012065.4-201ENST00000602445 679 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC239868.4-201ENST00000608318 671 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC025594.3-201ENST00000613068 790 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AL596245.1-201ENST00000618994 362 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 MIR7154-201ENST00000620673 73 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC009878.1-201ENST00000621819 340 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 FAM91A3P-201ENST00000456826 2544 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC103591.2-201ENST00000265259 766 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 OR11H4-201ENST00000315409 1082 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RNA5SP52-201ENST00000362448 134 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 Y_RNA.97-201ENST00000363094 102 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RN7SKP114-201ENST00000410327 279 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 UBTFL3-201ENST00000418934 1024 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 DDX39BP1-205ENST00000422507 192 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 CHEK2P5-201ENST00000423877 246 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 OR52B5P-201ENST00000435337 951 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 KNOP1P3-201ENST00000446933 426 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RPL7P52-201ENST00000449200 742 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RNU6-956P-201ENST00000458868 103 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AP000797.1-201ENST00000478870 387 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AP001025.2-201ENST00000490908 477 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC104109.1-201ENST00000498563 436 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC024558.1-201ENST00000505008 528 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC004069.2-201ENST00000505438 1114 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC093677.1-201ENST00000514414 678 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 RNU4-60P-201ENST00000517239 135 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 OR6C73P-201ENST00000546432 358 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC107954.1-201ENST00000565906 727 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 MTND6P33-201ENST00000571794 183 ntBASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF220Q5VTB9 AC103987.3-201ENST00000582071 292 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 1132 ms