Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RNU6-1119P-201ENST00000384349 108 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 SNORA68.2-201ENST00000391263 128 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 SNRPEP2-201ENST00000397592 279 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RPS16P5-201ENST00000406501 404 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AL512430.2-201ENST00000406786 339 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RN7SKP100-201ENST00000411258 284 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC004022.2-201ENST00000413824 193 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 ATG4AP1-201ENST00000416893 538 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC092647.1-201ENST00000420654 287 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RPS26P47-201ENST00000427219 348 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RPL36AP15-201ENST00000444514 266 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 USP9YP29-201ENST00000445112 563 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 TPT1P13-201ENST00000449760 499 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 SSXP1-201ENST00000453640 473 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 PPIAP21-201ENST00000464473 501 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC091868.1-201ENST00000508746 304 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC109458.1-201ENST00000508858 316 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RNU6-720P-201ENST00000516363 108 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LSM6P2-201ENST00000552208 177 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC083760.1-201ENST00000589621 670 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC093765.1-201ENST00000603758 881 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC092354.2-201ENST00000607786 514 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC068722.2-201ENST00000618734 544 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AP000346.3-201ENST00000622821 210 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 MTND4P26-201ENST00000415971 1359 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AL031985.3-201ENST00000565390 2449 ntBASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCHD3Q3KNS1 AC011978.2-201ENST00000569835 2054 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC007529.1-201ENST00000418574 2178 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 FGF7P2-201ENST00000332473 296 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 RNU1-82P-201ENST00000390851 165 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 DEFB108C-201ENST00000400154 252 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 Y_RNA.619-201ENST00000410951 90 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 RPL21P108-201ENST00000413857 481 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 RPL7P57-201ENST00000423238 740 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC245028.1-201ENST00000423259 256 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC234779.1-201ENST00000425910 285 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AL353597.2-202ENST00000434901 373 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AL831737.1-201ENST00000441288 271 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC011753.3-201ENST00000443436 406 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 TDGF1P1-201ENST00000445734 527 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 ARPC3P5-201ENST00000448802 534 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 EPS15P1-201ENST00000448836 336 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 AC009220.1-201ENST00000451614 275 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 MTCYBP1-201ENST00000454315 1119 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 SUMO2P2-201ENST00000456482 255 ntBASIC4.61□□□□□ -1.67
PTCHD3Q3KNS1 RPS5P7-201ENST00000456664 608 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms