Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.29-201ENST00000362570 113 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 RNU6-289P-201ENST00000364093 107 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.210-201ENST00000364161 110 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.483-201ENST00000384380 101 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 RNU1-106P-201ENST00000384382 164 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 RNU1-77P-201ENST00000390868 162 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AP000275.1-201ENST00000411943 390 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AL357752.1-201ENST00000412817 349 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 COX6CP15-201ENST00000426313 211 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC079781.2-201ENST00000446424 169 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC079168.1-201ENST00000458741 345 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 SNORA58-201ENST00000505219 137 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 RNU6-111P-201ENST00000517179 105 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 MYL12AP1-201ENST00000518490 515 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC006557.5-201ENST00000603126 811 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC020765.1-201ENST00000604296 328 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC243773.3-201ENST00000613270 256 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC004792.1-201ENST00000614523 137 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC092608.2-201ENST00000624427 218 ntBASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RSPO4Q2I0M5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 GUCY1B2-204ENST00000531898 1979 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AL136133.1-201ENST00000413694 376 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 GJA6P-201ENST00000415117 1042 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AL713922.1-201ENST00000416477 747 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AL133173.1-201ENST00000423458 397 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC007283.2-201ENST00000424739 197 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 HSPE1P16-201ENST00000426640 348 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 RPL7P4-203ENST00000430239 730 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 MTCO3P29-201ENST00000432119 779 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AL445928.1-201ENST00000435545 222 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 RPL7P29-201ENST00000437151 728 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC096775.1-201ENST00000437724 448 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 MED28P3-201ENST00000444288 531 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 TPT1P12-201ENST00000448968 492 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 FRG2FP-204ENST00000453982 852 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AL049874.2-201ENST00000492636 288 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 HMGB1P35-201ENST00000503360 598 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 RNU6-410P-201ENST00000517006 107 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 IGHV3-76-201ENST00000522465 295 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 IGLV3-6-201ENST00000523937 250 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 MIR3934-201ENST00000579806 107 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AP004247.3-201ENST00000608682 624 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC127459.3-201ENST00000624328 466 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 MIR7641-1-201ENST00000627518 61 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 KPNA2P1-201ENST00000458289 1591 ntBASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms