Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC063976.3-201ENST00000426849 329 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 FAM103A2P-201ENST00000444122 354 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AC245517.4-201ENST00000448601 281 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AC008280.2-201ENST00000455473 307 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 RPL5P30-201ENST00000465511 891 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC1.85□□□□□ -2.11
HSPG2P98160 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AL392112.1-201ENST00000605115 829 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AC015813.4-201ENST00000610469 179 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 AC092184.1-201ENST00000625042 715 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC1.85□□□□□ -2.11
HSPG2P98160 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.85□□□□□ -2.11
HSPG2P98160 AC134882.1-201ENST00000603738 1676 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 HMGN2P8-201ENST00000391458 268 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.85□□□□□ -2.11
HSPG2P98160 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.85□□□□□ -2.11
HSPG2P98160 SEPT7P6-201ENST00000469999 1143 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AP001636.2-201ENST00000525517 696 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.85□□□□□ -2.11
HSPG2P98160 DPRXP4-201ENST00000578053 568 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AC046143.2-201ENST00000609789 160 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HSPG2P98160 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.85□□□□□ -2.11
HSPG2P98160 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HSPG2P98160 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HSPG2P98160 AL356057.3-201ENST00000402607 340 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 AL356968.1-201ENST00000416622 474 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 MTCO1P39-201ENST00000426148 480 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 HMGN2P3-201ENST00000433603 273 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 HMGN2P5-201ENST00000436882 273 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC1.84□□□□□ -2.11
HSPG2P98160 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.84□□□□□ -2.11
HSPG2P98160 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC1.84□□□□□ -2.11
HSPG2P98160 AC099489.2-201ENST00000574976 260 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.84□□□□□ -2.11
HSPG2P98160 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HSPG2P98160 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HSPG2P98160 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HSPG2P98160 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HSPG2P98160 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HSPG2P98160 AL450338.1-201ENST00000407987 512 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 GAPDHP39-201ENST00000481866 979 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC1.84□□□□□ -2.11
HSPG2P98160 AC015917.1-201ENST00000579654 510 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HSPG2P98160 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HSPG2P98160 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.84□□□□□ -2.11
HSPG2P98160 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.84□□□□□ -2.11
HSPG2P98160 RPS4XP5-202ENST00000449995 1334 ntBASIC1.84□□□□□ -2.11
HSPG2P98160 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HSPG2P98160 RNA5SP99-201ENST00000364020 114 ntBASIC1.84□□□□□ -2.12
HSPG2P98160 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.84□□□□□ -2.12
HSPG2P98160 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.84□□□□□ -2.12
HSPG2P98160 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.84□□□□□ -2.12
HSPG2P98160 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.84□□□□□ -2.12
HSPG2P98160 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC1.84□□□□□ -2.12
HSPG2P98160 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC1.84□□□□□ -2.12
HSPG2P98160 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.84□□□□□ -2.12
HSPG2P98160 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.84□□□□□ -2.12
HSPG2P98160 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.12
HSPG2P98160 PARD3-204ENST00000374768 799 ntTSL 3 BASIC1.84□□□□□ -2.12
HSPG2P98160 RNU6-851P-201ENST00000384565 107 ntBASIC1.84□□□□□ -2.12
HSPG2P98160 AL136116.1-201ENST00000403591 381 ntBASIC1.84□□□□□ -2.12
HSPG2P98160 RNA5SP21-201ENST00000410917 96 ntBASIC1.84□□□□□ -2.12
HSPG2P98160 AC111000.2-201ENST00000507775 550 ntBASIC1.84□□□□□ -2.12
HSPG2P98160 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.84□□□□□ -2.12
HSPG2P98160 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.84□□□□□ -2.12
HSPG2P98160 ALG13-230ENST00000623189 458 ntTSL 3 BASIC1.84□□□□□ -2.12
HSPG2P98160 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC1.84□□□□□ -2.12
HSPG2P98160 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HSPG2P98160 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
HSPG2P98160 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HSPG2P98160 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HSPG2P98160 NFIB-202ENST00000380924 840 ntTSL 5 BASIC1.83□□□□□ -2.12
HSPG2P98160 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HSPG2P98160 OR2X1P-201ENST00000421144 687 ntBASIC1.83□□□□□ -2.12
HSPG2P98160 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.83□□□□□ -2.12
HSPG2P98160 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.83□□□□□ -2.12
HSPG2P98160 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.83□□□□□ -2.12
HSPG2P98160 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.83□□□□□ -2.12
HSPG2P98160 AL365400.2-201ENST00000605604 902 ntBASIC1.83□□□□□ -2.12
HSPG2P98160 AC026634.1-201ENST00000634369 198 ntBASIC1.83□□□□□ -2.12
HSPG2P98160 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HSPG2P98160 CR381670.1-201ENST00000624291 1693 ntBASIC1.83□□□□□ -2.12
HSPG2P98160 AC139713.2-215ENST00000641428 5037 ntBASIC1.83□□□□□ -2.12
HSPG2P98160 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.83□□□□□ -2.12
HSPG2P98160 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms