Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL031985.3-201ENST00000565390 2449 ntBASIC4.05□□□□□ -1.76
CCNA1P78396 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCNA1P78396 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCNA1P78396 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.05□□□□□ -1.76
CCNA1P78396 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNA1P78396 NSRP1P1-201ENST00000444067 1693 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AC018555.1-201ENST00000567548 1980 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 RN7SKP111-201ENST00000410349 271 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNA1P78396 PSMA2P3-201ENST00000429685 675 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 UBE2V1P1-201ENST00000430836 445 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 YWHAEP5-201ENST00000431545 765 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 DNAJC19P1-201ENST00000455312 319 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 SNORA59A-201ENST00000459326 152 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AL136126.1-201ENST00000473603 402 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AC093663.1-201ENST00000497190 394 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.04□□□□□ -1.76
CCNA1P78396 AC091515.1-201ENST00000548110 679 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNA1P78396 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.04□□□□□ -1.76
CCNA1P78396 AC012493.2-201ENST00000595083 291 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 MIR4727-201ENST00000622232 55 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 AC091905.1-201ENST00000624400 311 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 MTCO1P8-201ENST00000416914 1523 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.04□□□□□ -1.76
CCNA1P78396 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNA1P78396 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNA1P78396 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNA1P78396 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNA1P78396 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNA1P78396 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCNA1P78396 METTL21EP-201ENST00000298105 713 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 MIR128-1-201ENST00000384921 82 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNA1P78396 FO393419.3-201ENST00000428741 282 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 AL512649.1-201ENST00000428997 581 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 RPL7P29-201ENST00000437151 728 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNA1P78396 RPL23AP33-201ENST00000442301 452 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 AP000926.4-201ENST00000527351 454 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.03□□□□□ -1.76
CCNA1P78396 AGGF1P8-201ENST00000562979 1000 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 ZNF192P1-203ENST00000565888 810 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 AC106782.4-201ENST00000568264 210 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.03□□□□□ -1.76
CCNA1P78396 AC103710.3-201ENST00000608157 948 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNA1P78396 AL732372.2-225ENST00000642124 456 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNA1P78396 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNA1P78396 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNA1P78396 XPOTP1-201ENST00000443317 2398 ntBASIC4.03□□□□□ -1.76
CCNA1P78396 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 GABPAP-201ENST00000419271 1356 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 MTCO1P24-201ENST00000515438 1558 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNA1P78396 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNA1P78396 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 BDP1P-201ENST00000582658 1990 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 HMGB1P13-201ENST00000406019 642 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNA1P78396 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNA1P78396 RPS15AP40-201ENST00000419621 391 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.02□□□□□ -1.77
CCNA1P78396 MRPS18BP2-201ENST00000434310 759 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNA1P78396 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 AC092685.1-201ENST00000447960 1243 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 MTND3P6-201ENST00000485242 339 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 AC098799.1-201ENST00000504752 800 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 HMGB1P46-201ENST00000520062 610 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNA1P78396 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNA1P78396 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.02□□□□□ -1.77
CCNA1P78396 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNA1P78396 AC010928.3-201ENST00000587712 541 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 AC006557.5-201ENST00000603126 811 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 MIR7112-201ENST00000616126 65 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 AC048347.1-201ENST00000624621 427 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 SCARNA15.3-201ENST00000626315 122 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 SCARNA4.1-201ENST00000628597 123 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 AL157700.1-201ENST00000561973 1432 ntBASIC4.02□□□□□ -1.77
CCNA1P78396 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNA1P78396 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms