Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.25□□□□□ -1.57
YBX1P67809 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
YBX1P67809 AL606489.2-201ENST00000433886 234 ntBASIC5.25□□□□□ -1.57
YBX1P67809 CYCSP12-201ENST00000437729 300 ntBASIC5.25□□□□□ -1.57
YBX1P67809 GAPDHP58-201ENST00000438477 1006 ntBASIC5.25□□□□□ -1.57
YBX1P67809 Z80107.2-201ENST00000445127 392 ntBASIC5.25□□□□□ -1.57
YBX1P67809 AC090804.1-201ENST00000448870 490 ntBASIC5.25□□□□□ -1.57
YBX1P67809 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.25□□□□□ -1.57
YBX1P67809 RN7SL515P-201ENST00000463999 297 ntBASIC5.25□□□□□ -1.57
YBX1P67809 RPS15AP36-201ENST00000492022 382 ntBASIC5.25□□□□□ -1.57
YBX1P67809 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 AC005668.1-201ENST00000571142 476 ntBASIC5.25□□□□□ -1.57
YBX1P67809 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 MIR5186-201ENST00000577504 120 ntBASIC5.25□□□□□ -1.57
YBX1P67809 MIR4660-201ENST00000583549 74 ntBASIC5.25□□□□□ -1.57
YBX1P67809 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.25□□□□□ -1.57
YBX1P67809 AC105429.2-201ENST00000610567 517 ntBASIC5.25□□□□□ -1.57
YBX1P67809 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.25□□□□□ -1.57
YBX1P67809 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 AC093775.1-201ENST00000624154 1868 ntBASIC5.25□□□□□ -1.57
YBX1P67809 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.25□□□□□ -1.57
YBX1P67809 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
YBX1P67809 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.25□□□□□ -1.57
YBX1P67809 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
YBX1P67809 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
YBX1P67809 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.24□□□□□ -1.57
YBX1P67809 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
YBX1P67809 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
YBX1P67809 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
YBX1P67809 RNU6-251P-201ENST00000363235 104 ntBASIC5.24□□□□□ -1.57
YBX1P67809 Y_RNA.144-201ENST00000363521 113 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RN7SKP160-201ENST00000363804 340 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RNA5SP335-201ENST00000363817 110 ntBASIC5.24□□□□□ -1.57
YBX1P67809 Y_RNA.384-201ENST00000383909 102 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RNA5SP187-201ENST00000384400 119 ntBASIC5.24□□□□□ -1.57
YBX1P67809 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
YBX1P67809 RNU1-149P-201ENST00000390870 161 ntBASIC5.24□□□□□ -1.57
YBX1P67809 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
YBX1P67809 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 Y_RNA.625-201ENST00000411256 107 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AL355433.1-201ENST00000422804 300 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC022022.1-201ENST00000430304 178 ntBASIC5.24□□□□□ -1.57
YBX1P67809 CFL1P1-202ENST00000432948 411 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC236972.2-201ENST00000434979 310 ntBASIC5.24□□□□□ -1.57
YBX1P67809 BNIP3P2-201ENST00000441221 577 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AL133244.1-201ENST00000456007 258 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC063943.1-201ENST00000465434 453 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC090142.1-201ENST00000465776 462 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RN7SL51P-201ENST00000468230 285 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 RPS4XP1-201ENST00000482189 787 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RPS3AP50-201ENST00000487064 803 ntBASIC5.24□□□□□ -1.57
YBX1P67809 NDUFB5P1-201ENST00000508134 564 ntBASIC5.24□□□□□ -1.57
YBX1P67809 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.24□□□□□ -1.57
YBX1P67809 AC034159.1-201ENST00000513885 583 ntBASIC5.24□□□□□ -1.57
YBX1P67809 RNA5SP401-201ENST00000515920 127 ntBASIC5.24□□□□□ -1.57
YBX1P67809 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
YBX1P67809 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.24□□□□□ -1.57
YBX1P67809 AP002373.2-201ENST00000541631 1060 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.24□□□□□ -1.57
YBX1P67809 AL109766.1-201ENST00000555080 552 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AL359219.2-201ENST00000555184 348 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.24□□□□□ -1.57
YBX1P67809 AC007151.1-201ENST00000572774 483 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC099489.2-201ENST00000574976 260 ntBASIC5.24□□□□□ -1.57
YBX1P67809 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.24□□□□□ -1.57
YBX1P67809 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
YBX1P67809 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
YBX1P67809 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.24□□□□□ -1.57
YBX1P67809 AC113139.1-201ENST00000605049 239 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC090948.1-201ENST00000607464 549 ntBASIC5.24□□□□□ -1.57
YBX1P67809 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.24□□□□□ -1.57
YBX1P67809 AC009237.17-201ENST00000618111 748 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC009248.2-201ENST00000619826 254 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.24□□□□□ -1.57
YBX1P67809 AC018445.2-201ENST00000622987 260 ntBASIC5.24□□□□□ -1.57
YBX1P67809 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
YBX1P67809 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
YBX1P67809 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
YBX1P67809 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
YBX1P67809 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms