Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC1.97□□□□□ -2.09
RPS28P62857 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 SERPINA7P1-201ENST00000443077 631 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AC104389.3-201ENST00000445629 235 ntBASIC1.97□□□□□ -2.09
RPS28P62857 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 RBMY2EP-202ENST00000456360 940 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RN7SL297P-201ENST00000483161 293 ntBASIC1.97□□□□□ -2.09
RPS28P62857 FAM172BP-201ENST00000487497 1089 ntBASIC1.97□□□□□ -2.09
RPS28P62857 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 RPL7P23-201ENST00000493874 747 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RPS27P26-201ENST00000494583 239 ntBASIC1.97□□□□□ -2.09
RPS28P62857 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 AL390726.2-201ENST00000504791 343 ntBASIC1.97□□□□□ -2.09
RPS28P62857 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 AC107016.2-201ENST00000547968 190 ntBASIC1.97□□□□□ -2.09
RPS28P62857 PSMB7P1-201ENST00000556349 514 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 RPL10P14-201ENST00000565265 298 ntBASIC1.97□□□□□ -2.09
RPS28P62857 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 MIR3609-201ENST00000582661 80 ntBASIC1.97□□□□□ -2.09
RPS28P62857 MIR4701-201ENST00000583094 63 ntBASIC1.97□□□□□ -2.09
RPS28P62857 BOLA2P1-201ENST00000584794 232 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC1.97□□□□□ -2.09
RPS28P62857 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 AC079587.1-201ENST00000603846 277 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RPSAP75-201ENST00000605848 301 ntBASIC1.97□□□□□ -2.09
RPS28P62857 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 MIR6751-201ENST00000610479 63 ntBASIC1.97□□□□□ -2.09
RPS28P62857 Z99129.2-201ENST00000619967 314 ntBASIC1.97□□□□□ -2.09
RPS28P62857 UCA1.1-201ENST00000620952 75 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AC079597.1-201ENST00000624306 508 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 AC087359.1-201ENST00000508335 1740 ntBASIC1.97□□□□□ -2.09
RPS28P62857 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.96□□□□□ -2.09
RPS28P62857 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC1.96□□□□□ -2.09
RPS28P62857 AC009902.3-201ENST00000606235 2172 ntBASIC1.96□□□□□ -2.1
RPS28P62857 ASNSP3-201ENST00000451989 1306 ntBASIC1.96□□□□□ -2.1
RPS28P62857 MTND5P24-201ENST00000438892 1767 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AL080312.1-201ENST00000256654 824 ntBASIC1.96□□□□□ -2.1
RPS28P62857 TMSB4XP2-201ENST00000335179 210 ntBASIC1.96□□□□□ -2.1
RPS28P62857 RNU1-5P-201ENST00000362684 144 ntBASIC1.96□□□□□ -2.1
RPS28P62857 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC1.96□□□□□ -2.1
RPS28P62857 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 SNORA80E-201ENST00000384744 137 ntBASIC1.96□□□□□ -2.1
RPS28P62857 U3.30-201ENST00000391308 210 ntBASIC1.96□□□□□ -2.1
RPS28P62857 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPS28P62857 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 AL049697.2-201ENST00000403708 294 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AP000534.2-201ENST00000412729 568 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AL354890.1-201ENST00000413730 346 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AL356968.1-201ENST00000416622 474 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AC109638.1-201ENST00000417406 326 ntBASIC1.96□□□□□ -2.1
RPS28P62857 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC1.96□□□□□ -2.1
RPS28P62857 COX6CP15-201ENST00000426313 211 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 RPL7L1P10-201ENST00000427790 463 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPS28P62857 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC1.96□□□□□ -2.1
RPS28P62857 AC097523.2-201ENST00000435551 652 ntBASIC1.96□□□□□ -2.1
RPS28P62857 CLNS1AP1-201ENST00000435954 682 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC1.96□□□□□ -2.1
RPS28P62857 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC1.96□□□□□ -2.1
RPS28P62857 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 AC073522.1-201ENST00000483312 377 ntBASIC1.96□□□□□ -2.1
RPS28P62857 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC1.96□□□□□ -2.1
RPS28P62857 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC1.96□□□□□ -2.1
RPS28P62857 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.96□□□□□ -2.1
RPS28P62857 AC111000.3-201ENST00000508057 576 ntBASIC1.96□□□□□ -2.1
RPS28P62857 COX6B1P5-201ENST00000509843 249 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 RNA5SP43-201ENST00000516559 110 ntBASIC1.96□□□□□ -2.1
RPS28P62857 RNU6-579P-201ENST00000516879 102 ntBASIC1.96□□□□□ -2.1
RPS28P62857 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.96□□□□□ -2.1
RPS28P62857 COX6CP5-201ENST00000527162 228 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 AC005363.1-201ENST00000530779 351 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AP000857.1-201ENST00000532151 543 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 FAM60BP-201ENST00000578364 658 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AC005412.1-201ENST00000580812 1049 ntBASIC1.96□□□□□ -2.1
RPS28P62857 RN7SL690P-201ENST00000582087 240 ntBASIC1.96□□□□□ -2.1
RPS28P62857 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPS28P62857 MIR3117-201ENST00000584034 78 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AC083760.1-201ENST00000589621 670 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AL355812.1-201ENST00000603215 216 ntBASIC1.96□□□□□ -2.1
RPS28P62857 AC114878.2-201ENST00000604863 1251 ntBASIC1.96□□□□□ -2.1
RPS28P62857 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 AC245014.3-201ENST00000618589 347 ntBASIC1.96□□□□□ -2.1
RPS28P62857 HOTTIP_3.1-201ENST00000619957 337 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms