Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 MTND4P10-201ENST00000446199 1363 ntBASIC4.4□□□□□ -1.7
CLCN3P51790 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCN3P51790 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCN3P51790 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CLCN3P51790 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CLCN3P51790 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CLCN3P51790 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLCN3P51790 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLCN3P51790 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCN3P51790 ERHP2-201ENST00000402323 299 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AL450992.3-201ENST00000413192 568 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 AC007435.1-201ENST00000421086 415 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 OR2X1P-201ENST00000421144 687 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 Z93242.1-201ENST00000427102 353 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCN3P51790 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 USP9YP22-201ENST00000438971 294 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 RAB11AP1-201ENST00000442978 646 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC104306.1-201ENST00000449702 371 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC079776.3-201ENST00000450665 370 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 AL122001.1-201ENST00000457027 370 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 PNPLA4P1-201ENST00000458328 305 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC005410.1-202ENST00000460347 485 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 PPIAP15-201ENST00000479662 484 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC011037.1-201ENST00000483964 558 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 RPL21P129-201ENST00000491732 478 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 DYNLL1P6-201ENST00000503440 264 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.4□□□□□ -1.71
CLCN3P51790 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 SOD1P3-201ENST00000518682 454 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC022882.1-201ENST00000532142 501 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 YPEL5P3-201ENST00000547227 352 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.4□□□□□ -1.71
CLCN3P51790 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCN3P51790 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 AC145350.1-201ENST00000567426 208 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC007599.1-201ENST00000568688 1174 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC022069.1-201ENST00000582910 658 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC015688.2-201ENST00000584523 262 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 AC008687.2-201ENST00000597865 520 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 AL390816.3-201ENST00000604527 1066 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AL451086.1-201ENST00000605596 223 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLCN3P51790 AC006133.1-201ENST00000617106 264 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 MIR6864-201ENST00000617935 70 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLCN3P51790 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLCN3P51790 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCN3P51790 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCN3P51790 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCN3P51790 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCN3P51790 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.71
CLCN3P51790 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCN3P51790 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN3P51790 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCN3P51790 AC011155.1-201ENST00000316512 456 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN3P51790 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN3P51790 RNY3P9-201ENST00000384727 106 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 MIR23B-201ENST00000384832 97 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 ATP5F1P3-201ENST00000397213 657 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AL139098.1-201ENST00000407291 389 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCN3P51790 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCN3P51790 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 RPL7P59-201ENST00000447700 943 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 RPL23AP15-201ENST00000450202 459 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 Z99714.1-201ENST00000450463 807 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 HMGN3P1-201ENST00000453847 193 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 AC006517.1-201ENST00000480485 328 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCN3P51790 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCN3P51790 AC105313.1-201ENST00000509121 353 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 SNORA67.7-201ENST00000516664 135 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 NDUFA5P2-201ENST00000519723 344 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCN3P51790 MTCO2P15-201ENST00000532655 656 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms