Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC090948.2-201ENST00000607363 564 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 AL392048.1-201ENST00000613946 534 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 MIR6864-201ENST00000617935 70 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN9P43378 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.44□□□□□ -1.7
PTPN9P43378 MIR3974-201ENST00000637126 96 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 OR8B1P-202ENST00000641132 1178 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PTPN9P43378 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN9P43378 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PTPN9P43378 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN9P43378 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN9P43378 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN9P43378 LINC00561-201ENST00000565815 2738 ntBASIC4.44□□□□□ -1.7
PTPN9P43378 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN9P43378 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 AC074029.4-201ENST00000624796 1859 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTPN9P43378 SAGE4P-201ENST00000442271 3381 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTPN9P43378 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 Y_RNA.25-201ENST00000362528 102 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 ATP5F1P3-201ENST00000397213 657 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 RNA5SP36-201ENST00000410197 133 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC011933.1-201ENST00000413334 321 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AL136133.1-201ENST00000413694 376 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 MTCO3P1-205ENST00000422088 832 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC005345.1-201ENST00000431868 217 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 UBE2D3P1-201ENST00000436669 444 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AL354941.1-201ENST00000438600 464 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC069285.2-201ENST00000440210 275 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC009963.2-201ENST00000453431 138 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC116533.1-201ENST00000459748 321 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 LINC00888-204ENST00000487386 421 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 AC008958.1-201ENST00000511047 682 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 SNORD116-26-201ENST00000516006 96 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC009643.1-201ENST00000532030 391 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 ELOCP32-201ENST00000548625 324 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 PSMB7P1-201ENST00000556349 514 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN9P43378 CYP4A43P-201ENST00000568156 121 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 ISCA1P3-201ENST00000577104 373 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 MIR4277-201ENST00000578298 84 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 AC069304.3-201ENST00000603938 1084 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC106791.2-201ENST00000604680 391 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC112220.3-201ENST00000605502 502 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC091946.2-201ENST00000606105 291 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AL031666.3-201ENST00000609320 1006 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN9P43378 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN9P43378 RMST_9.1-201ENST00000619945 193 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC079248.2-201ENST00000623779 326 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 AC007671.2-201ENST00000637344 619 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTPN9P43378 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTPN9P43378 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN9P43378 SAGE2P-201ENST00000420011 2126 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN9P43378 AL390862.1-201ENST00000635467 1469 ntBASIC4.43□□□□□ -1.7
PTPN9P43378 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPN9P43378 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTPN9P43378 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 AL391994.1-201ENST00000254724 282 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 RNU6-216P-201ENST00000363282 104 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 RNA5SP366-201ENST00000365454 123 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms