Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 HIGD1AP15-201ENST00000416198 280 ntBASIC3.76□□□□□ -1.81
SOX3P41225 RPL22P18-201ENST00000417197 377 ntBASIC3.76□□□□□ -1.81
SOX3P41225 KRR1P1-201ENST00000419430 803 ntBASIC3.76□□□□□ -1.81
SOX3P41225 RPL17P36-201ENST00000420302 549 ntBASIC3.76□□□□□ -1.81
SOX3P41225 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.76□□□□□ -1.81
SOX3P41225 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX3P41225 Z93242.1-201ENST00000427102 353 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 MTCO1P54-201ENST00000430139 712 ntBASIC3.76□□□□□ -1.81
SOX3P41225 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX3P41225 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX3P41225 AL356535.1-201ENST00000440335 398 ntBASIC3.76□□□□□ -1.81
SOX3P41225 RPL21P89-201ENST00000444021 467 ntBASIC3.76□□□□□ -1.81
SOX3P41225 RPL7P59-201ENST00000447700 943 ntBASIC3.76□□□□□ -1.81
SOX3P41225 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 AC079776.3-201ENST00000450665 370 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AL162388.1-201ENST00000450912 352 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC098826.2-201ENST00000452011 651 ntBASIC3.76□□□□□ -1.81
SOX3P41225 MTND6P6-201ENST00000478031 263 ntBASIC3.76□□□□□ -1.81
SOX3P41225 FTH1P24-201ENST00000503502 462 ntBASIC3.76□□□□□ -1.81
SOX3P41225 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 AC114322.1-201ENST00000506771 926 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC048346.1-201ENST00000510247 144 ntBASIC3.76□□□□□ -1.81
SOX3P41225 RPL7L1P13-201ENST00000511702 739 ntBASIC3.76□□□□□ -1.81
SOX3P41225 RN7SKP96-201ENST00000516948 297 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.76□□□□□ -1.81
SOX3P41225 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX3P41225 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX3P41225 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.76□□□□□ -1.81
SOX3P41225 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX3P41225 AC017100.2-201ENST00000584628 355 ntBASIC3.76□□□□□ -1.81
SOX3P41225 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 AC008687.2-201ENST00000597865 520 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC113368.1-201ENST00000603736 382 ntBASIC3.76□□□□□ -1.81
SOX3P41225 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.76□□□□□ -1.81
SOX3P41225 AL390816.3-201ENST00000604527 1066 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AP003973.1-201ENST00000604639 691 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC024257.5-201ENST00000612739 531 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC105227.2-201ENST00000615075 605 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC011330.2-201ENST00000621680 635 ntBASIC3.76□□□□□ -1.81
SOX3P41225 AC124312.6-202ENST00000623624 418 ntBASIC3.76□□□□□ -1.81
SOX3P41225 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 AC090971.4-201ENST00000560291 1800 ntBASIC3.76□□□□□ -1.81
SOX3P41225 CYP1D1P-201ENST00000416662 1433 ntBASIC3.76□□□□□ -1.81
SOX3P41225 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX3P41225 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX3P41225 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX3P41225 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX3P41225 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 RNU6-839P-201ENST00000363347 108 ntBASIC3.75□□□□□ -1.81
SOX3P41225 SNORD35B-201ENST00000363660 87 ntBASIC3.75□□□□□ -1.81
SOX3P41225 RNU6-413P-201ENST00000384115 107 ntBASIC3.75□□□□□ -1.81
SOX3P41225 TMSB4XP8-201ENST00000402089 135 ntBASIC3.75□□□□□ -1.81
SOX3P41225 RN7SKP56-201ENST00000410513 331 ntBASIC3.75□□□□□ -1.81
SOX3P41225 TMSB4XP6-201ENST00000415187 135 ntBASIC3.75□□□□□ -1.81
SOX3P41225 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX3P41225 TMSB4XP1-201ENST00000424567 135 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.75□□□□□ -1.81
SOX3P41225 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 AL358472.1-201ENST00000431295 329 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC087650.1-201ENST00000431445 468 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SOX3P41225 PPIAP17-201ENST00000438507 471 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.75□□□□□ -1.81
SOX3P41225 AC007327.1-201ENST00000447461 264 ntBASIC3.75□□□□□ -1.81
SOX3P41225 RPL23AP15-201ENST00000450202 459 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 RPL21P71-201ENST00000465598 459 ntBASIC3.75□□□□□ -1.81
SOX3P41225 VPS26AP1-201ENST00000483197 979 ntBASIC3.75□□□□□ -1.81
SOX3P41225 RPL31P61-201ENST00000496160 376 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 AC098862.1-201ENST00000504991 413 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC011352.3-201ENST00000505162 593 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC109471.1-201ENST00000511631 612 ntBASIC3.75□□□□□ -1.81
SOX3P41225 FTH1P21-201ENST00000512179 511 ntBASIC3.75□□□□□ -1.81
SOX3P41225 RNA5SP143-201ENST00000516936 115 ntBASIC3.75□□□□□ -1.81
SOX3P41225 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.75□□□□□ -1.81
SOX3P41225 AC026407.1-201ENST00000518369 204 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 IGLVIV-53-201ENST00000520107 367 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AP001317.1-201ENST00000531194 960 ntBASIC3.75□□□□□ -1.81
SOX3P41225 MTCO2P15-201ENST00000532655 656 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.75□□□□□ -1.81
SOX3P41225 SERPINE4P-201ENST00000554978 281 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.75□□□□□ -1.81
SOX3P41225 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX3P41225 AC090695.1-201ENST00000561269 1222 ntBASIC3.75□□□□□ -1.81
SOX3P41225 AC025627.2-201ENST00000576220 160 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms