Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SMARCA1P28370 AL450338.1-201ENST00000407987 512 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 MIR1284-201ENST00000408337 120 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.13□□□□□ -1.59
SMARCA1P28370 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 CYCSP10-201ENST00000417973 294 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 MTCO3P1-205ENST00000422088 832 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC010881.1-201ENST00000433830 235 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 B3GNT2P1-201ENST00000434960 952 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 MTCYBP39-201ENST00000437562 491 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 AP000936.2-201ENST00000447151 681 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 MTND2P19-201ENST00000449129 1012 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.13□□□□□ -1.59
SMARCA1P28370 AC009220.1-201ENST00000451614 275 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 HMGB3P21-201ENST00000452483 547 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 RN7SL98P-201ENST00000462271 300 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC072039.1-201ENST00000477611 581 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC068724.1-201ENST00000487100 792 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AL024509.2-201ENST00000493462 493 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 RN7SL812P-201ENST00000493791 279 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.13□□□□□ -1.59
SMARCA1P28370 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.13□□□□□ -1.59
SMARCA1P28370 AC108043.1-201ENST00000512696 574 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 MTND4LP31-201ENST00000514859 294 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 MTCO1P30-201ENST00000515244 580 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC027309.2-201ENST00000520566 192 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.13□□□□□ -1.59
SMARCA1P28370 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 AC090515.3-201ENST00000560431 315 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC017100.2-201ENST00000584628 355 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 AC119751.7-201ENST00000600494 245 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 RPL26P30-202ENST00000602923 645 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC103792.1-201ENST00000603591 919 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC020634.1-201ENST00000608701 549 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC008443.7-201ENST00000622195 246 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC005086.4-201ENST00000623065 213 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 AC120349.2-201ENST00000625002 298 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 AC092192.1-201ENST00000633154 1018 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.13□□□□□ -1.59
SMARCA1P28370 XPOTP1-201ENST00000443317 2398 ntBASIC5.13□□□□□ -1.59
SMARCA1P28370 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SMARCA1P28370 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SMARCA1P28370 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMARCA1P28370 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMARCA1P28370 AC091046.3-201ENST00000631455 1574 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 SAGE2P-201ENST00000420011 2126 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SMARCA1P28370 MAPK10-303ENST00000641324 3959 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC018529.3-201ENST00000624212 2254 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.12□□□□□ -1.59
SMARCA1P28370 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SMARCA1P28370 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMARCA1P28370 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMARCA1P28370 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SMARCA1P28370 RNU6-251P-201ENST00000363235 104 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 MIR141-201ENST00000384975 95 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 U3.22-201ENST00000391120 215 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 CYCSP45-201ENST00000402289 315 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AL078604.1-201ENST00000404609 466 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMARCA1P28370 MTCO3P31-201ENST00000405526 789 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC016397.1-201ENST00000412463 242 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC004022.2-201ENST00000413824 193 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 UBTFL3-201ENST00000418934 1024 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AL592293.2-201ENST00000422292 996 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC233981.1-201ENST00000423224 461 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 RPL30P3-201ENST00000424262 333 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 RPS29P17-201ENST00000430795 166 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.12□□□□□ -1.59
SMARCA1P28370 AC096638.2-201ENST00000434965 711 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC241584.1-201ENST00000438469 1241 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC105402.2-201ENST00000438503 358 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 UBE2V1P3-201ENST00000439651 417 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.12□□□□□ -1.59
SMARCA1P28370 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.12□□□□□ -1.59
SMARCA1P28370 UBTFL6-201ENST00000477929 1024 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC013356.1-201ENST00000489027 564 ntBASIC5.12□□□□□ -1.59
SMARCA1P28370 AC106038.2-201ENST00000520706 568 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms