Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SNORA9.2-201ENST00000365361 133 ntBASIC2.49□□□□□ -2.01
APCP25054 AC112653.1-201ENST00000443851 386 ntBASIC2.49□□□□□ -2.01
APCP25054 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
APCP25054 NIPA2P5-201ENST00000452282 464 ntBASIC2.49□□□□□ -2.01
APCP25054 AC025445.1-201ENST00000502728 300 ntBASIC2.49□□□□□ -2.01
APCP25054 KLHL2P1-201ENST00000508691 521 ntBASIC2.49□□□□□ -2.01
APCP25054 AC018797.3-201ENST00000513388 1241 ntBASIC2.49□□□□□ -2.01
APCP25054 AC009237.17-201ENST00000618111 748 ntBASIC2.49□□□□□ -2.01
APCP25054 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
APCP25054 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
APCP25054 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APCP25054 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.48□□□□□ -2.01
APCP25054 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.48□□□□□ -2.01
APCP25054 MIR1287-201ENST00000408492 90 ntBASIC2.48□□□□□ -2.01
APCP25054 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
APCP25054 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.48□□□□□ -2.01
APCP25054 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
APCP25054 AC016727.1-205ENST00000605437 569 ntBASIC2.48□□□□□ -2.01
APCP25054 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.48□□□□□ -2.01
APCP25054 AC103798.2-201ENST00000624292 632 ntBASIC2.48□□□□□ -2.01
APCP25054 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
APCP25054 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.48□□□□□ -2.01
APCP25054 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.48□□□□□ -2.01
APCP25054 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
APCP25054 AC018555.1-201ENST00000567548 1980 ntBASIC2.48□□□□□ -2.01
APCP25054 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.48□□□□□ -2.01
APCP25054 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APCP25054 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
APCP25054 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
APCP25054 AL592148.1-201ENST00000413568 445 ntBASIC2.48□□□□□ -2.01
APCP25054 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.48□□□□□ -2.01
APCP25054 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.48□□□□□ -2.01
APCP25054 RNA5SP154-201ENST00000516193 111 ntBASIC2.48□□□□□ -2.01
APCP25054 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
APCP25054 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.48□□□□□ -2.01
APCP25054 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.48□□□□□ -2.01
APCP25054 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.48□□□□□ -2.01
APCP25054 AC026634.1-201ENST00000634369 198 ntBASIC2.48□□□□□ -2.01
APCP25054 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.47□□□□□ -2.01
APCP25054 SNORA3.2-201ENST00000408221 125 ntBASIC2.47□□□□□ -2.01
APCP25054 RPS26P47-201ENST00000427219 348 ntBASIC2.47□□□□□ -2.01
APCP25054 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.47□□□□□ -2.01
APCP25054 RPS12P18-201ENST00000442381 270 ntBASIC2.47□□□□□ -2.01
APCP25054 RPL12P26-201ENST00000452430 487 ntBASIC2.47□□□□□ -2.01
APCP25054 RPS26P3-201ENST00000470205 348 ntBASIC2.47□□□□□ -2.01
APCP25054 AC004057.1-201ENST00000485827 348 ntBASIC2.47□□□□□ -2.01
APCP25054 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.47□□□□□ -2.01
APCP25054 BTF3L4P4-201ENST00000506381 449 ntBASIC2.47□□□□□ -2.01
APCP25054 DPRXP4-201ENST00000578053 568 ntBASIC2.47□□□□□ -2.01
APCP25054 AC092184.1-201ENST00000625042 715 ntBASIC2.47□□□□□ -2.01
APCP25054 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
APCP25054 SCN1A-220ENST00000641603 12506 ntBASIC2.47□□□□□ -2.01
APCP25054 AC092079.1-201ENST00000558620 1985 ntBASIC2.47□□□□□ -2.01
APCP25054 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APCP25054 AC007496.3-201ENST00000624987 3443 ntBASIC2.47□□□□□ -2.01
APCP25054 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
APCP25054 Y_RNA.4-201ENST00000362333 112 ntBASIC2.47□□□□□ -2.01
APCP25054 AL139039.1-201ENST00000401900 692 ntBASIC2.47□□□□□ -2.01
APCP25054 RPL21P109-201ENST00000422213 475 ntBASIC2.47□□□□□ -2.01
APCP25054 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.47□□□□□ -2.01
APCP25054 SNORA31.21-201ENST00000517180 77 ntBASIC2.47□□□□□ -2.01
APCP25054 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APCP25054 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.47□□□□□ -2.01
APCP25054 MIR5047-201ENST00000579212 100 ntBASIC2.47□□□□□ -2.01
APCP25054 AC015871.2-201ENST00000603605 948 ntBASIC2.47□□□□□ -2.01
APCP25054 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.47□□□□□ -2.01
APCP25054 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.47□□□□□ -2.01
APCP25054 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
APCP25054 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.46□□□□□ -2.01
APCP25054 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.46□□□□□ -2.01
APCP25054 AC112184.1-201ENST00000505179 312 ntBASIC2.46□□□□□ -2.01
APCP25054 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.46□□□□□ -2.01
APCP25054 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.46□□□□□ -2.01
APCP25054 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.46□□□□□ -2.01
APCP25054 AC044913.1-201ENST00000557200 430 ntBASIC2.46□□□□□ -2.01
APCP25054 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.46□□□□□ -2.01
APCP25054 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APCP25054 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
APCP25054 AC087190.4-201ENST00000574616 8334 ntBASIC2.46□□□□□ -2.02
APCP25054 FAM35BP-202ENST00000497389 3337 ntBASIC2.46□□□□□ -2.02
APCP25054 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
APCP25054 RPS3AP26-201ENST00000398259 784 ntBASIC2.46□□□□□ -2.02
APCP25054 AC002075.2-201ENST00000425207 252 ntBASIC2.46□□□□□ -2.02
APCP25054 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.46□□□□□ -2.02
APCP25054 AC011242.1-201ENST00000433596 1158 ntBASIC2.46□□□□□ -2.02
APCP25054 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.46□□□□□ -2.02
APCP25054 MTCO3P16-201ENST00000454456 754 ntBASIC2.46□□□□□ -2.02
APCP25054 AC008280.2-201ENST00000455473 307 ntBASIC2.46□□□□□ -2.02
APCP25054 AC099560.2-201ENST00000457554 255 ntBASIC2.46□□□□□ -2.02
APCP25054 AC010468.1-201ENST00000461022 817 ntBASIC2.46□□□□□ -2.02
APCP25054 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.46□□□□□ -2.02
APCP25054 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.46□□□□□ -2.02
APCP25054 OR5AP1P-201ENST00000529730 940 ntBASIC2.46□□□□□ -2.02
APCP25054 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.46□□□□□ -2.02
APCP25054 GMCL1P2-201ENST00000605230 823 ntBASIC2.46□□□□□ -2.02
APCP25054 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.46□□□□□ -2.02
APCP25054 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APCP25054 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.46□□□□□ -2.02
APCP25054 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
APCP25054 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms