Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.73□□□□□ -1.81
TPM1P09493 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.73□□□□□ -1.81
TPM1P09493 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM1P09493 PTGES3P5-201ENST00000455109 434 ntBASIC3.73□□□□□ -1.81
TPM1P09493 RPL23AP55-201ENST00000498163 452 ntBASIC3.73□□□□□ -1.81
TPM1P09493 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM1P09493 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.73□□□□□ -1.81
TPM1P09493 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.73□□□□□ -1.81
TPM1P09493 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM1P09493 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM1P09493 AC118273.1-201ENST00000525324 3006 ntBASIC3.73□□□□□ -1.81
TPM1P09493 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TPM1P09493 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM1P09493 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TPM1P09493 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM1P09493 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.72□□□□□ -1.81
TPM1P09493 RPL7P26-201ENST00000333817 754 ntBASIC3.72□□□□□ -1.81
TPM1P09493 SNORD9-201ENST00000362566 104 ntBASIC3.72□□□□□ -1.81
TPM1P09493 MTATP6P31-201ENST00000406985 692 ntBASIC3.72□□□□□ -1.81
TPM1P09493 RPL23AP47-201ENST00000408017 460 ntBASIC3.72□□□□□ -1.81
TPM1P09493 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM1P09493 AC007899.1-201ENST00000412776 775 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC006960.1-201ENST00000419980 153 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.72□□□□□ -1.81
TPM1P09493 OR2B8P-201ENST00000432841 938 ntBASIC3.72□□□□□ -1.81
TPM1P09493 OR4C10P-201ENST00000434991 931 ntBASIC3.72□□□□□ -1.81
TPM1P09493 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
TPM1P09493 SLC31A1P1-201ENST00000451221 567 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AL513343.1-201ENST00000451818 792 ntBASIC3.72□□□□□ -1.81
TPM1P09493 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.72□□□□□ -1.81
TPM1P09493 SNORD105B-201ENST00000458770 79 ntBASIC3.72□□□□□ -1.81
TPM1P09493 snoU13.7-201ENST00000459220 104 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC091564.1-201ENST00000464563 479 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC104687.1-201ENST00000485829 412 ntBASIC3.72□□□□□ -1.81
TPM1P09493 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM1P09493 AC026979.1-201ENST00000492525 396 ntBASIC3.72□□□□□ -1.81
TPM1P09493 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.72□□□□□ -1.81
TPM1P09493 HIGD1AP3-201ENST00000515857 278 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC008562.1-201ENST00000521763 330 ntBASIC3.72□□□□□ -1.81
TPM1P09493 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM1P09493 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM1P09493 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM1P09493 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TPM1P09493 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.72□□□□□ -1.81
TPM1P09493 MIR5685-201ENST00000579080 79 ntBASIC3.72□□□□□ -1.81
TPM1P09493 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM1P09493 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.72□□□□□ -1.81
TPM1P09493 AC010591.1-201ENST00000603941 649 ntBASIC3.72□□□□□ -1.81
TPM1P09493 SNORA51-201ENST00000606420 132 ntBASIC3.72□□□□□ -1.81
TPM1P09493 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.72□□□□□ -1.81
TPM1P09493 AL359535.1-201ENST00000612100 1087 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC107905.1-201ENST00000616204 426 ntBASIC3.72□□□□□ -1.81
TPM1P09493 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM1P09493 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.72□□□□□ -1.81
TPM1P09493 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.72□□□□□ -1.81
TPM1P09493 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TPM1P09493 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
TPM1P09493 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TPM1P09493 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TPM1P09493 AC011978.2-201ENST00000569835 2054 ntBASIC3.71□□□□□ -1.82
TPM1P09493 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 RPL21P3-201ENST00000395517 478 ntBASIC3.71□□□□□ -1.82
TPM1P09493 BTBD10P2-201ENST00000404779 676 ntBASIC3.71□□□□□ -1.82
TPM1P09493 PPIAP31-201ENST00000405422 495 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AL445189.1-201ENST00000405722 338 ntBASIC3.71□□□□□ -1.82
TPM1P09493 ATP5A1P2-201ENST00000412323 255 ntBASIC3.71□□□□□ -1.82
TPM1P09493 RPL32P35-201ENST00000415214 394 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 MTCO3P4-201ENST00000419236 787 ntBASIC3.71□□□□□ -1.82
TPM1P09493 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.71□□□□□ -1.82
TPM1P09493 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.71□□□□□ -1.82
TPM1P09493 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 RRM2P4-201ENST00000441721 562 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 NF1P3-201ENST00000457709 450 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AC146507.2-201ENST00000460608 476 ntBASIC3.71□□□□□ -1.82
TPM1P09493 SUMO1P1-201ENST00000497904 306 ntBASIC3.71□□□□□ -1.82
TPM1P09493 POU5F1P7-201ENST00000508759 541 ntBASIC3.71□□□□□ -1.82
TPM1P09493 RPL12P22-201ENST00000519073 490 ntBASIC3.71□□□□□ -1.82
TPM1P09493 COX6B1P6-201ENST00000522347 255 ntBASIC3.71□□□□□ -1.82
TPM1P09493 MTCYBP41-201ENST00000528913 1123 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.71□□□□□ -1.82
TPM1P09493 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.71□□□□□ -1.82
TPM1P09493 AC074029.2-201ENST00000551045 634 ntBASIC3.71□□□□□ -1.82
TPM1P09493 OR4T1P-201ENST00000554933 911 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.71□□□□□ -1.82
TPM1P09493 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.71□□□□□ -1.82
TPM1P09493 AC112230.1-201ENST00000604342 547 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AL365400.2-201ENST00000605604 902 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AL391497.1-201ENST00000608671 547 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AC110792.4-201ENST00000609843 298 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.71□□□□□ -1.82
TPM1P09493 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TPM1P09493 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TPM1P09493 AC007256.1-201ENST00000392253 2765 ntBASIC3.71□□□□□ -1.82
TPM1P09493 AL672296.1-201ENST00000427780 2158 ntBASIC3.7□□□□□ -1.82
TPM1P09493 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TPM1P09493 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms