Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU1-45P-201ENST00000517191 141 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 COX6B1P6-201ENST00000522347 255 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 C1DP5-201ENST00000525775 383 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AP003168.1-201ENST00000530091 307 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 OSBPL9P3-201ENST00000534523 595 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 BNIP3P5-201ENST00000562290 498 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC079148.1-201ENST00000565944 819 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC106734.1-201ENST00000568646 663 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 MIR3186-201ENST00000577404 85 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 RNU1-30P-201ENST00000606575 163 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AL512506.1-201ENST00000613918 449 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AL162574.2-201ENST00000614618 657 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AC097460.3-201ENST00000623099 442 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 PNPT1P2-201ENST00000456768 2050 ntBASIC3.14□□□□□ -1.91
HLA-DPB1P04440 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DPB1P04440 AL139811.1-201ENST00000424779 2299 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC024341.1-201ENST00000526444 1552 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 ENSAP3-201ENST00000312710 333 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 RNA5SP27-201ENST00000363839 119 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 RNU6-1293P-201ENST00000384077 107 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 HNRNPDP2-201ENST00000406475 478 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 RNU2-65P-201ENST00000410162 185 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC019070.1-201ENST00000415008 1024 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 GTF2IP23-201ENST00000423746 351 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 MTATP6P11-201ENST00000428071 670 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC017083.1-201ENST00000428093 483 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 KCTD10P1-201ENST00000434203 625 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 UBE2CP3-201ENST00000502715 450 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 KCTD9P5-201ENST00000504141 1170 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 MTND3P24-201ENST00000506306 329 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 HMGN1P11-201ENST00000508668 303 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 SNORA70.14-201ENST00000516205 110 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC023632.4-201ENST00000517783 191 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC009948.4-201ENST00000604692 675 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL391497.1-201ENST00000608671 547 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 OR6R2P-201ENST00000609216 300 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL121772.2-201ENST00000614331 297 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 RMST_10.1-201ENST00000616309 154 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 STMN1P1-201ENST00000617809 440 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 FRG1HP-204ENST00000617940 757 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 RNU6-156P-201ENST00000621869 107 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL161637.1-201ENST00000622380 412 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AL356094.1-201ENST00000624663 1212 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC119674.1-207ENST00000641355 633 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 NMD3P1-201ENST00000439704 1488 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 MFSD8-213ENST00000641134 1327 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 AC119744.1-201ENST00000454746 1715 ntBASIC3.13□□□□□ -1.91
HLA-DPB1P04440 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPB1P04440 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC090229.1-201ENST00000590983 1609 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 EI24P2-201ENST00000397776 1076 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AL445189.1-201ENST00000405722 338 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 PTGES3P2-201ENST00000407942 482 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC126124.2-201ENST00000413542 321 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 PRELID3BP11-201ENST00000414230 479 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC017079.2-201ENST00000416102 485 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 RPL36AP36-201ENST00000418616 301 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms