Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
CHRNA1P02708 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CHRNA1P02708 LINC02471-203ENST00000641941 4752 ntBASIC3.97□□□□□ -1.77
CHRNA1P02708 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.96□□□□□ -1.77
CHRNA1P02708 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CHRNA1P02708 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CHRNA1P02708 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.96□□□□□ -1.78
CHRNA1P02708 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 RNU1-33P-201ENST00000364249 162 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 RNU6-650P-201ENST00000365658 111 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 HLFP1-201ENST00000402375 499 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 RN7SKP56-201ENST00000410513 331 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 RPL31P45-201ENST00000419532 356 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 PPIAP17-201ENST00000438507 471 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AF228730.2-201ENST00000438784 848 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 RPS7P5-201ENST00000441482 581 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC098824.1-201ENST00000453565 980 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC096992.1-201ENST00000459808 709 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC092451.1-201ENST00000480211 153 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC109458.1-201ENST00000508858 316 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 MIR2114-201ENST00000516645 80 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC010306.1-201ENST00000523223 1117 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AL121766.1-201ENST00000547436 487 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA1P02708 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 NTAN1P1-201ENST00000603150 646 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AC069304.3-201ENST00000603938 1084 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC069209.1-201ENST00000619282 651 ntBASIC3.96□□□□□ -1.78
CHRNA1P02708 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.96□□□□□ -1.78
CHRNA1P02708 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.96□□□□□ -1.78
CHRNA1P02708 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.96□□□□□ -1.78
CHRNA1P02708 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA1P02708 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHRNA1P02708 RNU6-328P-201ENST00000390887 106 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 HMGB3P18-201ENST00000406327 590 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 USP9YP19-201ENST00000412165 485 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC004022.2-201ENST00000413824 193 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC009237.5-201ENST00000414271 501 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AL138799.3-201ENST00000438968 350 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC010655.1-201ENST00000449336 292 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC025518.1-201ENST00000479856 347 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 NIPA2P2-201ENST00000496376 1083 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 MTATP6P22-201ENST00000507369 598 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 RN7SKP283-201ENST00000517197 270 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 NCAPGP2-201ENST00000557911 754 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC027104.1-201ENST00000563702 681 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.95□□□□□ -1.78
CHRNA1P02708 MIR5186-201ENST00000577504 120 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC007687.1-201ENST00000602704 304 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 AC125494.3-201ENST00000602759 455 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 STMN1P1-201ENST00000617809 440 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
CHRNA1P02708 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA1P02708 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA1P02708 DCAF13P1-201ENST00000495256 1330 ntBASIC3.95□□□□□ -1.78
CHRNA1P02708 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHRNA1P02708 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
CHRNA1P02708 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CHRNA1P02708 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.94□□□□□ -1.78
CHRNA1P02708 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms