Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC017037.1-201ENST00000508460 471 ntBASIC4.16□□□□□ -1.74
LDLRP01130 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.16□□□□□ -1.74
LDLRP01130 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LDLRP01130 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDLRP01130 AL356057.1-201ENST00000533798 831 ntBASIC4.16□□□□□ -1.74
LDLRP01130 OR8R1P-201ENST00000543943 764 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.16□□□□□ -1.74
LDLRP01130 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.16□□□□□ -1.74
LDLRP01130 MTCYBP33-201ENST00000575007 1130 ntBASIC4.16□□□□□ -1.74
LDLRP01130 MIR4444-1-201ENST00000581696 74 ntBASIC4.16□□□□□ -1.74
LDLRP01130 MIR3158-1-201ENST00000583596 81 ntBASIC4.16□□□□□ -1.74
LDLRP01130 MIR4444-2-201ENST00000584390 74 ntBASIC4.16□□□□□ -1.74
LDLRP01130 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.16□□□□□ -1.74
LDLRP01130 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.16□□□□□ -1.74
LDLRP01130 AC021749.1-201ENST00000604322 607 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC080013.3-201ENST00000606839 578 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AP004247.3-201ENST00000608682 624 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC092140.2-201ENST00000618027 521 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC079416.3-201ENST00000624479 549 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AP003072.4-201ENST00000624580 310 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AF001550.2-201ENST00000636643 217 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.16□□□□□ -1.74
LDLRP01130 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.16□□□□□ -1.74
LDLRP01130 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
LDLRP01130 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LDLRP01130 OR11H5P-202ENST00000641612 1325 ntBASIC4.16□□□□□ -1.74
LDLRP01130 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LDLRP01130 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LDLRP01130 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDLRP01130 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.15□□□□□ -1.74
LDLRP01130 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.15□□□□□ -1.74
LDLRP01130 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.15□□□□□ -1.74
LDLRP01130 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LDLRP01130 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LDLRP01130 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
LDLRP01130 AC108467.2-201ENST00000617640 1597 ntBASIC4.15□□□□□ -1.74
LDLRP01130 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LDLRP01130 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.15□□□□□ -1.74
LDLRP01130 AC090229.1-201ENST00000590983 1609 ntBASIC4.15□□□□□ -1.74
LDLRP01130 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LDLRP01130 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 NACA3P-201ENST00000359690 648 ntBASIC4.15□□□□□ -1.75
LDLRP01130 RN7SKP44-201ENST00000363602 316 ntBASIC4.15□□□□□ -1.75
LDLRP01130 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.15□□□□□ -1.75
LDLRP01130 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LDLRP01130 AC119751.3-201ENST00000399720 670 ntBASIC4.15□□□□□ -1.75
LDLRP01130 RNA5SP317-201ENST00000410176 116 ntBASIC4.15□□□□□ -1.75
LDLRP01130 MIR1911-201ENST00000410783 80 ntBASIC4.15□□□□□ -1.75
LDLRP01130 RNA5SP311-201ENST00000411290 116 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 AL031736.2-201ENST00000426573 787 ntBASIC4.15□□□□□ -1.75
LDLRP01130 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.15□□□□□ -1.75
LDLRP01130 MTND1P34-201ENST00000438556 671 ntBASIC4.15□□□□□ -1.75
LDLRP01130 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 HSFY6P-201ENST00000445573 403 ntBASIC4.15□□□□□ -1.75
LDLRP01130 MTND1P29-201ENST00000448112 647 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AC079776.3-201ENST00000450665 370 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AC012671.1-201ENST00000451912 203 ntBASIC4.15□□□□□ -1.75
LDLRP01130 RPL21P126-201ENST00000470049 478 ntBASIC4.15□□□□□ -1.75
LDLRP01130 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 AC091951.3-201ENST00000504093 246 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AC010486.2-201ENST00000505572 483 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.15□□□□□ -1.75
LDLRP01130 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 Y_RNA.655-201ENST00000515919 96 ntBASIC4.15□□□□□ -1.75
LDLRP01130 RNA5SP315-201ENST00000516340 116 ntBASIC4.15□□□□□ -1.75
LDLRP01130 RNA5SP312-201ENST00000517068 116 ntBASIC4.15□□□□□ -1.75
LDLRP01130 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.15□□□□□ -1.75
LDLRP01130 HIGD1AP6-201ENST00000521833 279 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.15□□□□□ -1.75
LDLRP01130 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.15□□□□□ -1.75
LDLRP01130 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.15□□□□□ -1.75
LDLRP01130 PSMB7P1-201ENST00000556349 514 ntBASIC4.15□□□□□ -1.75
LDLRP01130 MTND4P33-201ENST00000556706 766 ntBASIC4.15□□□□□ -1.75
LDLRP01130 MIR4666A-201ENST00000580160 79 ntBASIC4.15□□□□□ -1.75
LDLRP01130 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDLRP01130 NF1P5-201ENST00000588287 448 ntBASIC4.15□□□□□ -1.75
LDLRP01130 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.15□□□□□ -1.75
LDLRP01130 AC090425.2-201ENST00000608818 501 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 AC103858.2-201ENST00000621471 543 ntBASIC4.15□□□□□ -1.75
LDLRP01130 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.15□□□□□ -1.75
LDLRP01130 AC019278.1-201ENST00000623516 479 ntBASIC4.15□□□□□ -1.75
LDLRP01130 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.15□□□□□ -1.75
LDLRP01130 AC010300.1-201ENST00000600671 5134 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms