Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC018692.3-201ENST00000623929 123 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTDNEP1O95476 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTDNEP1O95476 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTDNEP1O95476 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC017002.4-201ENST00000604721 1525 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC073325.2-201ENST00000339545 159 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 RNU6-618P-201ENST00000363518 112 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 RNU6-1251P-201ENST00000364502 107 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC110754.1-201ENST00000399740 601 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AL389915.1-201ENST00000422463 466 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 MTND3P4-201ENST00000453537 303 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 RN7SL863P-201ENST00000462370 296 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 RPS27P29-201ENST00000463110 252 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC010683.1-201ENST00000473673 378 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 MIR1254-2-201ENST00000579553 63 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC019176.2-201ENST00000611579 315 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 AL590410.1-201ENST00000617925 333 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC026422.1-201ENST00000623961 452 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 AC093831.2-201ENST00000624393 3427 ntBASIC3.62□□□□□ -1.83
CTDNEP1O95476 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTDNEP1O95476 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CTDNEP1O95476 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC100871.1-201ENST00000507871 1456 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 RNU6-152P-201ENST00000384037 107 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 SNORA54-201ENST00000384281 123 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 SNORA46-201ENST00000384762 135 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 SNORD67-201ENST00000390833 111 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 SNORD65-201ENST00000391079 73 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 RPL21P3-201ENST00000395517 478 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL583834.1-201ENST00000406943 343 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 RPL32P35-201ENST00000415214 394 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AJ239321.1-201ENST00000424255 564 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 OR2AS1P-201ENST00000427827 319 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL050321.1-201ENST00000432363 400 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL392003.1-201ENST00000434394 243 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL591503.2-201ENST00000442314 1005 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC146507.2-201ENST00000460608 476 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC109925.1-201ENST00000478069 331 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 RPL21P129-201ENST00000491732 478 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC110794.1-201ENST00000505816 425 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 PHBP14-201ENST00000512887 367 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC245166.1-201ENST00000521012 253 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 MIR5680-201ENST00000577577 84 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC022387.2-201ENST00000604050 448 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC012314.7-201ENST00000619693 93 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 MIR6075-201ENST00000620782 95 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC004943.3-201ENST00000624116 600 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AC119744.1-201ENST00000454746 1715 ntBASIC3.61□□□□□ -1.83
CTDNEP1O95476 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTDNEP1O95476 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.61□□□□□ -1.83
CTDNEP1O95476 AL118496.1-201ENST00000440201 1812 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 RAD1P1-201ENST00000231383 813 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 OR5T3-201ENST00000303059 1023 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 SNORA48.7-201ENST00000391302 135 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 NPM1P10-201ENST00000398310 865 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 AL353692.2-201ENST00000407054 335 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 MTCYBP29-201ENST00000436327 1006 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 AL353093.1-201ENST00000441292 436 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms