Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SSSCA1O60232 FAM35CP-201ENST00000554755 2470 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSSCA1O60232 RPL9P7-201ENST00000330965 580 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RN7SKP280-201ENST00000364196 304 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RNU4-7P-201ENST00000364758 141 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SSSCA1O60232 SNORD67-201ENST00000390833 111 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RNA5SP129-201ENST00000410276 118 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RNU2-6P-201ENST00000411404 190 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 MTND4LP21-201ENST00000415303 295 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 AL807761.1-201ENST00000417622 171 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RPL31P45-201ENST00000419532 356 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 AC048351.1-201ENST00000420064 602 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RPL23AP4-201ENST00000427757 463 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 C4BPAP2-201ENST00000428434 478 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 AL445584.1-201ENST00000431451 330 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 HSPD1P21-201ENST00000436541 245 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AL592437.1-201ENST00000443781 492 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 VN1R48P-201ENST00000448149 1036 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.45□□□□□ -2.02
SSSCA1O60232 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.45□□□□□ -2.02
SSSCA1O60232 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.45□□□□□ -2.02
SSSCA1O60232 MIR5186-201ENST00000577504 120 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 RN7SL339P-201ENST00000580597 296 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC090425.2-201ENST00000608818 501 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 AC107871.2-201ENST00000612894 502 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC092184.1-201ENST00000625042 715 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 MIR6733-201ENST00000635723 61 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SSSCA1O60232 AC009487.2-201ENST00000420969 6821 ntBASIC2.45□□□□□ -2.02
SSSCA1O60232 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSSCA1O60232 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.45□□□□□ -2.02
SSSCA1O60232 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSSCA1O60232 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.44□□□□□ -2.02
SSSCA1O60232 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.44□□□□□ -2.02
SSSCA1O60232 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSSCA1O60232 RNA5SP189-201ENST00000364920 115 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SSSCA1O60232 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SSSCA1O60232 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.44□□□□□ -2.02
SSSCA1O60232 RPL7P25-201ENST00000404151 721 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.44□□□□□ -2.02
SSSCA1O60232 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.44□□□□□ -2.02
SSSCA1O60232 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.44□□□□□ -2.02
SSSCA1O60232 AC009965.2-201ENST00000425328 970 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 RSL24D1P6-201ENST00000426934 401 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 YWHAZP7-201ENST00000436906 631 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.44□□□□□ -2.02
SSSCA1O60232 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSSCA1O60232 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.44□□□□□ -2.02
SSSCA1O60232 RPL23AP11-201ENST00000475260 469 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AC091959.2-201ENST00000477363 321 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 RPS27AP9-201ENST00000477681 438 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 RPS29P2-201ENST00000479278 136 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AC078918.1-201ENST00000498515 228 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.44□□□□□ -2.02
SSSCA1O60232 AC108471.1-201ENST00000513977 287 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.44□□□□□ -2.02
SSSCA1O60232 OR5B10P-201ENST00000532869 642 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AC007536.1-201ENST00000533382 349 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 RPL21P12-201ENST00000559810 515 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
SSSCA1O60232 AC023043.3-201ENST00000593113 385 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AF230666.2-201ENST00000602328 725 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AP003117.2-201ENST00000606010 545 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AL121772.2-201ENST00000614331 297 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 AL590240.3-201ENST00000621416 943 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.44□□□□□ -2.02
SSSCA1O60232 AL118496.1-201ENST00000440201 1812 ntBASIC2.44□□□□□ -2.02
SSSCA1O60232 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSSCA1O60232 ASNSP3-201ENST00000451989 1306 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SSSCA1O60232 AC093010.3-201ENST00000570269 15214 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SSSCA1O60232 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSSCA1O60232 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSSCA1O60232 SNORD15B-201ENST00000384714 146 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 SAR1AP2-201ENST00000392696 594 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 AC098592.2-201ENST00000413158 265 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.43□□□□□ -2.02
SSSCA1O60232 OR1AA1P-201ENST00000419597 916 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.43□□□□□ -2.02
SSSCA1O60232 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.43□□□□□ -2.02
SSSCA1O60232 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.43□□□□□ -2.02
SSSCA1O60232 NPM1P24-201ENST00000428039 894 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 MTCO3P21-201ENST00000430791 643 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 GOT2P5-201ENST00000433995 546 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 CCRL1P1-201ENST00000449542 1053 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.43□□□□□ -2.02
SSSCA1O60232 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.43□□□□□ -2.02
SSSCA1O60232 AC005912.1-201ENST00000495392 255 ntBASIC2.43□□□□□ -2.02
SSSCA1O60232 AC023050.1-201ENST00000498198 304 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms