Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 AC245054.1-201ENST00000420944 258 ntBASIC3.16□□□□□ -1.9
SGCEO43556 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.16□□□□□ -1.9
SGCEO43556 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.16□□□□□ -1.9
SGCEO43556 AL662791.1-201ENST00000441992 928 ntBASIC3.16□□□□□ -1.9
SGCEO43556 Z77249.1-201ENST00000444622 1175 ntBASIC3.16□□□□□ -1.9
SGCEO43556 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 VN1R17P-201ENST00000472048 1090 ntBASIC3.16□□□□□ -1.9
SGCEO43556 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 PCBP2P3-201ENST00000509726 843 ntBASIC3.16□□□□□ -1.9
SGCEO43556 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 RNU6-579P-201ENST00000516879 102 ntBASIC3.16□□□□□ -1.9
SGCEO43556 RN7SKP283-201ENST00000517197 270 ntBASIC3.16□□□□□ -1.9
SGCEO43556 RN7SKP289-201ENST00000517244 295 ntBASIC3.16□□□□□ -1.9
SGCEO43556 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.16□□□□□ -1.9
SGCEO43556 AP000926.4-201ENST00000527351 454 ntBASIC3.16□□□□□ -1.9
SGCEO43556 OR5AP1P-201ENST00000529730 940 ntBASIC3.16□□□□□ -1.9
SGCEO43556 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.16□□□□□ -1.9
SGCEO43556 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 AC006518.1-201ENST00000541449 943 ntBASIC3.16□□□□□ -1.9
SGCEO43556 NTAN1P1-201ENST00000603150 646 ntBASIC3.16□□□□□ -1.9
SGCEO43556 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 AC005156.1-201ENST00000613371 573 ntBASIC3.16□□□□□ -1.9
SGCEO43556 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.16□□□□□ -1.9
SGCEO43556 AC112200.1-201ENST00000625015 234 ntBASIC3.16□□□□□ -1.9
SGCEO43556 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SGCEO43556 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SGCEO43556 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.15□□□□□ -1.9
SGCEO43556 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SGCEO43556 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SGCEO43556 AC007656.2-201ENST00000624902 4547 ntBASIC3.15□□□□□ -1.91
SGCEO43556 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.15□□□□□ -1.91
SGCEO43556 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
SGCEO43556 U8.11-201ENST00000384699 133 ntBASIC3.15□□□□□ -1.91
SGCEO43556 U8.12-201ENST00000384701 133 ntBASIC3.15□□□□□ -1.91
SGCEO43556 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 MIR1250-201ENST00000408098 113 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RANP4-201ENST00000413361 655 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RPL17P36-201ENST00000420302 549 ntBASIC3.15□□□□□ -1.91
SGCEO43556 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AC012498.1-201ENST00000424037 437 ntBASIC3.15□□□□□ -1.91
SGCEO43556 MTCO1P57-201ENST00000432182 261 ntBASIC3.15□□□□□ -1.91
SGCEO43556 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 XKRYP6-201ENST00000440468 1116 ntBASIC3.15□□□□□ -1.91
SGCEO43556 XKRYP3-201ENST00000442113 1116 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RPS3AP46-201ENST00000448352 682 ntBASIC3.15□□□□□ -1.91
SGCEO43556 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 NF1P3-201ENST00000457709 450 ntBASIC3.15□□□□□ -1.91
SGCEO43556 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.15□□□□□ -1.91
SGCEO43556 U8.18-201ENST00000459285 133 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RPL21P104-201ENST00000464143 478 ntBASIC3.15□□□□□ -1.91
SGCEO43556 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.15□□□□□ -1.91
SGCEO43556 CYCSP20-201ENST00000473154 315 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RN7SL442P-201ENST00000473804 320 ntBASIC3.15□□□□□ -1.91
SGCEO43556 HMGB3P14-201ENST00000494195 599 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RPL7L1P13-201ENST00000511702 739 ntBASIC3.15□□□□□ -1.91
SGCEO43556 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AC008494.2-201ENST00000514544 370 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RN7SKP96-201ENST00000516948 297 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RNU6-889P-201ENST00000517189 103 ntBASIC3.15□□□□□ -1.91
SGCEO43556 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
SGCEO43556 AC007991.1-201ENST00000522680 631 ntBASIC3.15□□□□□ -1.91
SGCEO43556 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.15□□□□□ -1.91
SGCEO43556 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.15□□□□□ -1.91
SGCEO43556 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.15□□□□□ -1.91
SGCEO43556 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.15□□□□□ -1.91
SGCEO43556 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.15□□□□□ -1.91
SGCEO43556 AL731566.2-201ENST00000618971 317 ntBASIC3.15□□□□□ -1.91
SGCEO43556 AC069209.1-201ENST00000619282 651 ntBASIC3.15□□□□□ -1.91
SGCEO43556 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.15□□□□□ -1.91
SGCEO43556 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.15□□□□□ -1.91
SGCEO43556 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SGCEO43556 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.15□□□□□ -1.91
SGCEO43556 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SGCEO43556 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.14□□□□□ -1.91
SGCEO43556 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
SGCEO43556 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SGCEO43556 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SGCEO43556 RNA5SP42-201ENST00000364278 115 ntBASIC3.14□□□□□ -1.91
SGCEO43556 RNA5SP235-201ENST00000365411 114 ntBASIC3.14□□□□□ -1.91
SGCEO43556 OR52E6-202ENST00000379946 954 ntBASIC3.14□□□□□ -1.91
SGCEO43556 AC007066.1-201ENST00000392902 381 ntBASIC3.14□□□□□ -1.91
SGCEO43556 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.14□□□□□ -1.91
SGCEO43556 U3.39-201ENST00000408569 239 ntBASIC3.14□□□□□ -1.91
SGCEO43556 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCEO43556 CRYBB2P1-203ENST00000415709 538 ntBASIC3.14□□□□□ -1.91
SGCEO43556 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SGCEO43556 AL035458.1-201ENST00000433096 585 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms