Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AP000254.1-201ENST00000609934 520 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC025588.4-201ENST00000615802 908 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 AC009704.2-201ENST00000618739 483 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC019206.1-201ENST00000621938 425 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM38O00635 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM38O00635 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 AL390237.1-201ENST00000404226 1415 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 ZNF33CP-201ENST00000432492 2030 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 ZNF37BP-203ENST00000452306 1352 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM38O00635 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM38O00635 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM38O00635 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM38O00635 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
TRIM38O00635 Y_RNA.77-201ENST00000362962 107 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 RNU6-984P-201ENST00000363236 109 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM38O00635 AC019155.1-201ENST00000382242 574 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 Y_RNA.559-201ENST00000384686 107 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 U3.30-201ENST00000391308 210 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 RPS3AP26-201ENST00000398259 784 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AL357515.1-201ENST00000402967 542 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AL021407.1-201ENST00000404531 386 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AL023807.1-201ENST00000407932 359 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 RNU6-757P-201ENST00000410334 100 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 RN7SKP263-201ENST00000411194 309 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM38O00635 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 TAF9P1-201ENST00000445421 515 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 TAF9P2-201ENST00000454958 515 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AC093899.1-201ENST00000457984 376 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM38O00635 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM38O00635 RPS23P7-201ENST00000466210 444 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 NIP7P2-201ENST00000485801 544 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 RPL7P38-201ENST00000488396 739 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM38O00635 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 OR4R3P-201ENST00000525084 838 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM38O00635 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM38O00635 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM38O00635 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM38O00635 AC234778.2-201ENST00000566241 354 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM38O00635 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM38O00635 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 AC009643.2-201ENST00000603543 1448 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AC115621.1-201ENST00000604653 858 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 FAM27B-201ENST00000610601 213 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AC131238.1-201ENST00000617135 328 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 AC073968.1-201ENST00000618594 637 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 CR381572.2-201ENST00000624852 397 ntBASIC4.76□□□□□ -1.65
TRIM38O00635 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM38O00635 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM38O00635 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TRIM38O00635 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM38O00635 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC108751.5-201ENST00000492880 1336 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TRIM38O00635 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 DHX40P1-201ENST00000588725 1412 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 IL6STP1-201ENST00000346911 1020 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 RNU1-83P-201ENST00000363426 164 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 RNU6-931P-201ENST00000363850 107 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 SNORA70F-201ENST00000384142 135 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM38O00635 AL049697.2-201ENST00000403708 294 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC114755.2-201ENST00000413520 361 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 ELOCP17-201ENST00000414751 326 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC073136.2-201ENST00000417282 849 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM38O00635 RPS27AP7-201ENST00000422792 455 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM38O00635 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 RN7SL517P-201ENST00000462240 305 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 DEFB109F-201ENST00000491870 277 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 SCARNA22-201ENST00000503991 125 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 XKRY-201ENST00000510392 1100 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms