Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 snoU109.1-201ENST00000459339 135 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC087385.1-201ENST00000475062 312 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AP000797.2-201ENST00000475768 606 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 RPL7P16-201ENST00000479738 738 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC034222.1-201ENST00000494052 532 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 TXNP6-201ENST00000510190 310 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC109464.2-201ENST00000510242 943 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC010625.1-201ENST00000511296 403 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC034159.1-201ENST00000513885 583 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC100784.1-201ENST00000522790 310 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 MTND4LP18-201ENST00000526864 291 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AP002453.2-201ENST00000533503 320 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC008033.2-201ENST00000542626 177 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC005951.1-201ENST00000576706 485 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC090312.1-201ENST00000580637 348 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 MIR4307-201ENST00000582802 84 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AL353997.4-201ENST00000586196 166 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 TPMTP1-201ENST00000592307 737 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC087783.2-201ENST00000605070 562 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 MTND5P29-201ENST00000458676 1807 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 AC126323.6-202ENST00000568092 3511 ntBASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
PCDHGA3Q9Y5H0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA3Q9Y5H0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA3Q9Y5H0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA3Q9Y5H0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
PCDHGA3Q9Y5H0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PCDHGA3Q9Y5H0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL049555.1-201ENST00000562834 1933 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 SNORD82-201ENST00000365530 70 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL356276.2-201ENST00000435919 558 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC002381.1-201ENST00000447049 280 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 TPT1P13-201ENST00000449760 499 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 RPL7P31-201ENST00000450192 724 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 MTCYBP1-201ENST00000454315 1119 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 BX322784.1-201ENST00000455793 1077 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 RNA5SP464-201ENST00000516251 108 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 OR4G1P-201ENST00000588632 938 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC113194.1-201ENST00000606037 500 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AC138932.5-201ENST00000617759 563 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AL139811.1-201ENST00000424779 2299 ntBASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PCDHGA3Q9Y5H0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms